Plasmodium brasilianum: 92371853
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Entry
92371853 CDS
T10352
Symbol
MKS88_003766
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
92371853 (MKS88_003766)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrs03019
]
92371853 (MKS88_003766)
Messenger RNA biogenesis [BR:
pbrs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
92371853 (MKS88_003766)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Aladin
2CompART
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
92371853
NCBI-ProteinID:
XP_067072578
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Position
11:complement(<1398282..>1400156)
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AA seq
624 aa
AA seq
DB search
MKEFNDNTSFLPNVVSNENVNNGSSISNDENIAHNENVDENENVDENENVDENENVDENE
NIDDNENVRHSENLGYDENVDDNENVDDNENVDDNENVGHSENVYHRESLYQGKSLYHGE
SLYHSENIYKNELIDDNDIAPISDCVTSNYNDVTVVSDEEEAKEKKEEYNKSFSTVKMER
PIWNIDKIAFYEIVLKQLKDDNLTESFDILKRELNLEENKTAEENYLFNLFTKNIFKKPE
INNEEEYRKKLTSYEILNKKLNISNNNCCILNYDVKNGKVRKVYSYEVTDRIELIHKNKC
ICCATNFTNNILCSGGSDNIIKIAKINDIKKKKIFTIDNKHTGKINCLKFHPMKNILFSA
SDDCTIQIMDVNKILKKKKQQYNKYNKNIREKLHDDLFRNIIIQDKNPFISMCVHPCGDF
LYASNKNENILKLYDLETLTCFTSSDQNTYHTSSINDISATSDGNIYASVSVDGNIKIWD
GHNSHLIHTQLNAHNGYSIQSVKFNKSNCYIITSGLDGQTKIWDIRNFKSLFTFGHGLSC
SSNKSIFMNDELLLANIIQTNDHFTSKFYIYNSYFGNIEHNIQDIHIDQISDIVNAKDGL
NVHTAGYDCVCKTIKIEQKYVHDY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatttaacgacaatacttcttttttgccaaatgttgtaagtaatgaaaatgtc
aataatggtagtagtatatcgaacgatgaaaatatcgcgcataatgaaaacgtagatgaa
aatgaaaacgtagatgaaaatgaaaacgtagatgaaaatgaaaacgtagatgaaaatgaa
aacatagatgataatgaaaacgtacgtcatagtgaaaatttaggttatgatgaaaacgta
gatgataatgaaaacgtagatgataatgaaaacgtagatgataatgaaaacgtaggtcat
agcgaaaacgtatatcatcgtgaaagcctgtatcaaggtaaaagcctatatcatggggaa
agcctatatcatagtgaaaacatatataaaaatgaattaatagatgataatgacattgca
ccaatcagcgactgtgtaacaagtaattataatgacgtaactgttgtgtcagatgaagaa
gaggctaaagaaaaaaaagaggagtacaacaaatcgtttagcactgtaaagatggaaaga
cccatttggaacattgataaaattgcattttatgaaattgttttgaaacaacttaaagat
gacaatttaactgaatcgttcgatattttaaaaagggagttaaatttagaagaaaataag
actgctgaagaaaattatctattcaatttatttacaaagaatatatttaaaaaacctgaa
ataaacaatgaagaggaatatagaaaaaaattgacgtcatacgaaatcttaaataaaaaa
ttaaacatatccaacaacaattgttgcattctaaattacgatgtaaaaaacggaaaagtg
agaaaagtatattcttatgaagttacggatcgtattgaattaattcataaaaataaatgt
atttgttgtgcaacaaattttacaaataatattttgtgttcaggtggttcagataatatt
ataaaaatagctaaaataaatgatataaaaaaaaaaaaaatttttactattgataataaa
catacaggaaaaattaattgccttaaatttcatcctatgaaaaatattttattttcagca
agcgatgattgtacaattcagattatggatgtaaataaaattttaaaaaagaaaaagcaa
caatataataaatataataaaaatatacgtgaaaaattacatgatgacctgttcagaaat
attataattcaagataaaaatccttttatatccatgtgtgtacatccgtgtggtgatttc
ctttatgcaagtaataaaaatgaaaatatattaaaattatatgaccttgaaactttaaca
tgttttacgtcatctgatcaaaacacatatcatacttcatccattaatgatattagtgca
acatccgatggaaatatatatgcttccgtttccgttgatgggaatataaaaatttgggat
ggtcataattctcatttaatacatacacagttaaatgcacataatgggtactctattcaa
tcagtcaaatttaacaagtcaaattgttatatcataacatcaggacttgatggacaaaca
aaaatttgggatataagaaattttaaatccctttttacctttggacatgggttatcatgt
tcttcaaataaaagtatctttatgaatgatgaattgctcttagctaatattattcaaaca
aatgatcattttacatcgaaattttatatttacaattcctattttggaaatatagagcat
aacatacaagatatacacatagatcagatatctgatattgttaatgcaaaagatgggttg
aatgtgcacacagctgggtatgattgtgtgtgcaagaccattaaaattgagcagaaatac
gtgcacgattattag
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integrated database retrieval system
