Plasmodium brasilianum: 92372235
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Entry
92372235 CDS
T10352
Symbol
MKS88_004148
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92372235 (MKS88_004148)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrs03041
]
92372235 (MKS88_004148)
Spliceosome [BR:
pbrs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
92372235 (MKS88_004148)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
ANAPC4_WD40
PRP4
Beta-prop_WDR75_1st
ASA1
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
CFAP251_N
RMC1_N
NBCH_WD40
WD_LRWD1
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
92372235
NCBI-ProteinID:
XP_067071742
LinkDB
All DBs
Position
12:complement(<760103..>762019)
Genome browser
AA seq
638 aa
AA seq
DB search
MKISDVLSDSKLHESLKLRKSELNSSQISKDNILEEFDIKNKIRKVSLGIPTKDIDVKNV
LRLLKEPICLFGEDSYDKRKRLKTVLVTKYDKLIIKKNNENEEEVEEFKNILKKYYIDFS
SLCDVDSPEYIKIKQLEDELVKKRLKEQSIEGKGIDSRDKLKEKFYTESSEELKFSRLDI
TLKTLPRIFLYKEMINNFQNKYQKEDYENYIISYNEHMKNEFDLYISQLGDDRPLTMGKF
SPDNSVFAVSSYNTYINIFNYKNDNYNIVKTLKKGHDDKINCIEWNYPNNYSYYNTLNYT
DIRKKDLLLASCSSDKTFCIWRPFPGEDINDYNITHKSYFEGNKKRIRKNNTEIDDTDER
KGDHTKIFEKNGHEVKTNCGELKKQASKQNGNKDEYNIEDENEQEVDDKNAKGNKYLLCK
VKAHEDRINKICFHPLNKYVLTCSEDETIKFFDIETQKELFYQEGHNAIVYTATFNPYGN
LYLSGDSKGGLMLWDIRTGRNIDKKQAVHNNCIMNINFNPFMPNMFCTCSSDNTIKIFDL
RNFKISCNILAHNKIVTDAIFEPTYGRYITSCSFDTFIKIWDSVNFYCTKILYNNENKVR
NVDISPDGKFISSTSFDRTWKLYKNTEFVQDNILSHLF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagcgatgtccttagtgattcaaaattacatgaaagcctaaaattaagaaag
agtgagttgaacagcagtcaaattagtaaggacaatatattggaagaatttgatataaaa
aataagataagaaaagttagcttaggtattccaacaaaagatatagatgtaaaaaatgtt
ttaaggttattaaaggaacctatttgtttatttggtgaggacagttatgataagaggaaa
agattaaaaactgttttagtcacaaaatatgataaactgataataaaaaaaaataatgaa
aatgaagaagaagttgaagaattcaagaatatcttaaaaaaatattatattgattttagt
agtttatgtgatgtagattctcctgaatatataaaaataaaacaactagaagatgaatta
gtaaaaaaaagattaaaagaacaaagtatagaaggaaagggaattgattctagggataaa
ttaaaggagaagttttatacagaaagttcagaagagctcaaattctcacgtctagatata
acgctaaaaacattacctagaatatttttatacaaagaaatgataaataattttcaaaac
aaatatcaaaaagaagattatgaaaattatattatttcttataatgaacatatgaaaaat
gaattcgatttatatatttcacagttaggtgatgacagaccattaaccatgggaaaattt
tcccctgataacagcgtttttgcagtaagtagttataacacatatattaatatatttaat
tacaaaaatgataattataatattgtaaaaactcttaaaaaaggtcatgatgataagata
aactgcatagagtggaactaccccaataattattcttactataatacattaaattataca
gatataaggaaaaaagatttattgctagcttcctgctcatcagataaaaccttttgtata
tggaggccttttccaggtgaagacataaacgattataatattacacataaaagctatttt
gaaggaaataaaaaaagaattagaaaaaataacactgaaatagatgatacagatgaaagg
aaaggagatcacaccaaaatttttgaaaaaaatggtcatgaagtgaagacgaattgtgga
gagcttaagaagcaggctagtaaacagaatgggaataaggatgaatataatatagaagat
gaaaatgaacaggaggtggatgacaaaaatgccaaaggcaacaaatatttgctatgtaaa
gtaaaagctcatgaagacagaataaataagatatgttttcatcctttgaacaaatatgta
ttaacatgttcagaagatgaaacaataaaattttttgatatagaaactcaaaaggaatta
ttttatcaagaagggcacaatgctatagtatatactgctacatttaatccttatggaaat
ttatatttatcaggagattcaaaaggcggattaatgttatgggatattagaacaggaaga
aatatagataaaaaacaagcagttcataataactgtattatgaatattaattttaatcca
tttatgccaaatatgttttgtacgtgttcttcggataacactattaaaatatttgacttg
agaaattttaaaatttcttgtaatatactagcgcacaacaaaattgtcacagatgcaatt
tttgaaccaacatatggtagatacataacatcatgttcttttgacacttttattaaaata
tgggactctgtaaatttttattgcactaaaattttatataataatgaaaataaagtaaga
aatgttgacatatcccctgatggtaaatttatatcctccacttcttttgacagaacatgg
aaattgtacaaaaacacagaatttgttcaggacaatattctttctcatttattttga
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