Plasmodium brasilianum: 92372706
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Entry
92372706 CDS
T10352
Symbol
MKS88_004619
Name
(RefSeq) ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92372706 (MKS88_004619)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrs03041
]
92372706 (MKS88_004619)
03009 Ribosome biogenesis [BR:
pbrs03009
]
92372706 (MKS88_004619)
Enzymes [BR:
pbrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92372706 (MKS88_004619)
Spliceosome [BR:
pbrs03041
]
Complex A
U1 snRNP components
U1 related factors
92372706 (MKS88_004619)
Complex B
92372706 (MKS88_004619)
Ribosome biogenesis [BR:
pbrs03009
]
Eukaryotic type
Pre-60S particles
Helicases
92372706 (MKS88_004619)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
92372706
NCBI-ProteinID:
XP_067072201
LinkDB
All DBs
Position
12:complement(3036405..3039944)
Genome browser
AA seq
520 aa
AA seq
DB search
MRGFNNFNNRYPNYPDYTNAYGNYQAYPQYRTNYGNFSGHNNNSSNLGNNLVQIDWSTVK
LVPFEKNFYKEHEDISNLSAKEVKDIRDKHRITILEGENVPNPVESINKIGFPDYVLKSL
KNNNIITPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPSLKYGDGPV
VLVLAPTRELAEQIRQECIKFSIESKIRNTCAYGGVPKSGQIYALRQGVHILIACPGRLI
DLLEQNVTNLMRVTYLVLDEADKMLDMGFEIQIRKIVEQIRPDRQTLMWSATWPKEVQAL
ARDLCKEQPIHVNVGSLTLTACRRIKQEIYLVEEHEKIIHLKSLLQRIFRENDRIIVFVE
TKKNADFITKALRLDGMPALCIHGDKKQDERRWVLNDFKTGKSPILIATDVASRGLDIKN
VKYVINFDFPNQIEDYVHRIGRTGRAGAHGASFTFLTSDKYRLAKDLVKILRESEQPVPP
QLEKISFSVSSNQRRNPYYSYGRSGHNANSIPLKGSNRYY
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtttcaacaatttcaataatagatacccaaattaccccgattatacaaatgcc
tacggaaattaccaagcctatccacagtatagaacaaattatggcaatttttcgggacat
aataataactcgagtaacctaggaaataacttagttcaaattgattggagtactgttaaa
ttagtcccatttgaaaaaaatttttacaaagaacatgaagatataagtaatttatcagca
aaagaagtaaaggatataagagacaagcacagaataacaattttggaaggtgaaaatgta
ccaaacccagtagaatcaattaataaaattgggtttcctgattatgttttaaaatcttta
aaaaataataatattattacaccaacacctatacaaatacaaggttggcctattgcatta
tcaggaaaagatatgattggtaaagcagaaactggtagtgggaaaacattagcttttatt
ttacctgcatttgttcatattttagcgcaacctagcttaaaatatggtgatggacctgtt
gttttggtattagctcctacaagagaattggcggaacaaattcgtcaggaatgtattaag
ttttctattgaatcaaaaataagaaatacatgtgcatatggaggagtaccgaaaagtggt
cagatttatgctttaagacagggtgttcatattttaattgcttgcccaggtcgtttaatt
gatttattagaacaaaatgttactaatctaatgagagttacttatttagttttagacgaa
gctgataaaatgttagatatgggttttgaaatacaaattagaaaaattgttgaacaaatt
agaccagataggcaaaccttaatgtggtcagcaacttggccgaaagaagttcaagcgtta
gcaagagatctatgtaaagaacaacccatacatgtaaatgttggttcgttaactctaact
gcttgtcgtagaattaaacaagaaatatatcttgttgaggaacatgaaaaaataattcat
ctaaaatcgctacttcagagaatattcagggagaacgacagaataattgtatttgtggaa
actaaaaaaaacgctgattttattacaaaagcactacgactagatggaatgcctgccctt
tgtatacatggggataaaaagcaggacgagcgaagatgggtattgaatgattttaaaaca
ggaaaaagccctattttaattgcaaccgatgtagcttcaagagggttagacataaagaat
gtaaaatatgttataaattttgatttccctaatcaaattgaagattatgttcatagaatt
ggtagaaccggtagagcaggagcgcatggagcttcttttacattcttaacgtcagataaa
tatagattagcgaaagatttagttaaaatattaagagaatctgaacaacctgttcctcca
caattagaaaaaatttctttttcagtgagtagtaatcaaagaagaaatccttattatagt
tacggtcgttcaggacacaatgctaatagcattcctttaaaaggaagtaataggtattac
tag
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