Plasmodium brasilianum: 92372731
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Entry
92372731 CDS
T10352
Symbol
MKS88_004644
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03018
RNA degradation
pbrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92372731 (MKS88_004644)
09123 Folding, sorting and degradation
03018 RNA degradation
92372731 (MKS88_004644)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrs03019
]
92372731 (MKS88_004644)
03041 Spliceosome [BR:
pbrs03041
]
92372731 (MKS88_004644)
Messenger RNA biogenesis [BR:
pbrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92372731 (MKS88_004644)
mRNA degradation factors
5'-3' decay
Lsm complex
92372731 (MKS88_004644)
Spliceosome [BR:
pbrs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
92372731 (MKS88_004644)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
92372731
NCBI-ProteinID:
XP_067072226
LinkDB
All DBs
Position
12:complement(<3161578..>3162264)
Genome browser
AA seq
101 aa
AA seq
DB search
MATISGSETFLPLALMDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEYTYVNN
IKKVNKIKKLLLNGLNITIMVPGGSPVNYYDHEEKLEENIA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctactataagtgggtcagagacgtttttacccctggccctaatggataagtgtatt
ggaagtaaaatatggattatgatgaaaggtgacaaggaaatagttggaaaactagttggt
tttgacgagtatgttaacatggtgctggaagatgttaccgaatatacttatgtaaacaac
attaaaaaagtaaataaaattaaaaagttattattaaatggtttaaatataacaataatg
gttccaggaggatcaccagtaaattattacgatcatgaagaaaagttggaagaaaatatt
gcttga
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