Plasmodium brasilianum: 92373375
Help
Entry
92373375 CDS
T10352
Symbol
MKS88_005288
Name
(RefSeq) DNA ligase I
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03030
DNA replication
pbrs03410
Base excision repair
pbrs03420
Nucleotide excision repair
pbrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92373375 (MKS88_005288)
03410 Base excision repair
92373375 (MKS88_005288)
03420 Nucleotide excision repair
92373375 (MKS88_005288)
03430 Mismatch repair
92373375 (MKS88_005288)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbrs03032
]
92373375 (MKS88_005288)
03400 DNA repair and recombination proteins [BR:
pbrs03400
]
92373375 (MKS88_005288)
Enzymes [BR:
pbrs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
92373375 (MKS88_005288)
6.5.1.6 DNA ligase (ATP or NAD+)
92373375 (MKS88_005288)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
92373375 (MKS88_005288)
DNA replication proteins [BR:
pbrs03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
92373375 (MKS88_005288)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
92373375 (MKS88_005288)
DNA repair and recombination proteins [BR:
pbrs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
92373375 (MKS88_005288)
NER (nucleotide excision repair)
Other NER factors
92373375 (MKS88_005288)
MMR (mismatch excision repair)
Other MMR factors
92373375 (MKS88_005288)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
ICE2
Motif
Other DBs
NCBI-GeneID:
92373375
NCBI-ProteinID:
XP_067070503
LinkDB
All DBs
Position
14:complement(<290131..>293142)
Genome browser
AA seq
903 aa
AA seq
DB search
MKLLMLLFLTKMVFCNFKKYVKSDYNYIVPFIKRKKLYNHKINFNVKVFKNFRKNTSNRY
NEFLKCLYNPKKPNDHEKENTNVKDEEKESTKRKIVGEGHAKTKKLKGKSENEIKKGSLF
NCAVNEDEKINDLSSPKFNPVHFDVSNLYLSEKDKEKHKFKDSLLFTFLTNTFNQIEELK
GSGTGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYLNVEAGVGEALILKTM
SEAYSRTEASIKKDLQQIEDLGIIAESCSCKMRTIFPLPRLTIQFVFNELKSIPNLSGSN
SQQKKREVIKKLLVSAKTTEAKYIVRFLQQRLRIGVNSATVLQALSYAFILTRPSIPDEI
IREGKLMNDKLLNAKVKDKEEEGDDSDNTVESEKNSIKGEGKDVKIEKKEVSDNIKKETE
NLGKEFDFYSLVKTIKLRNEKMNKPNLFFNIEKVGDTRLLPIFKELKKAYCEVNSDSDIF
ECMEKSVKSALCELPNIEIIIQNLLNGDDMNMLSKKCTVKTGVPVQPMLAKPTKGIQEVL
DRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVRDQISSGATE
CIIDSEVVAYDIENKKILPFQVLTTRKRKDVDIENIKVKVCLFPFDLICCNGVSVIKEPL
EIRRKLLYSLLKCKEGILSYATHSEMNNIEDIDIFLQDAIENSCEGLMVKTLLDNASYEP
SRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLASYNSETENFQTVCK
AGTGFSDEILNTLYDLLNDKIIPNKKSYYEVSDKLNPDVWFDAHYVWEVKAADLSLSPVH
TAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTTQQIIDFYEAQFTSNKNKNNDFNEDS
ESE
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattgatgctactgtttttaacaaaaatggttttttgtaattttaaaaaatat
gtgaaaagtgattataattatatagtaccatttataaaaaggaaaaagctgtataatcat
aaaataaattttaatgtaaaagtttttaagaattttagaaagaacacatcaaatagatat
aatgaatttttaaaatgtctatacaatcctaagaaaccaaatgatcatgaaaaggaaaac
acaaacgtaaaggatgaagaaaaagaatcaacaaaaagaaaaattgtcggtgaggggcat
gcaaaaacgaaaaagttaaagggaaaaagtgagaatgaaataaaaaaaggctctttattt
aactgtgccgttaatgaagatgaaaaaataaacgatctgagctcccccaagtttaatcct
gttcattttgatgtaagtaatttatatttatcagaaaaggataaagaaaaacacaagttt
aaagattctttattatttacgttccttacaaatacatttaatcaaatagaagaactaaaa
ggtagtgggacgggtagtaaaaaaaatgtagcaattattttgtcaaatgtgtttagagta
ttaatttattatagcccgaatgatttaattcctgctgtttatataacattaaataaagta
gcaccagattatttaaatgtagaagcaggtgtaggagaagcattgattttaaaaaccatg
tcagaagcatatagtcggacagaggcaagtataaaaaaagatttacaacaaatagaagat
ttaggaattatagcggaaagttgttcatgtaaaatgagaaccatttttcctttacctcgt
ttaactattcaatttgtatttaatgaattaaaaagcataccaaatcttagtggttcaaat
tctcagcagaaaaaaagagaagtaattaaaaagttattagttagcgcaaaaaccactgaa
gcgaaatatattgtacgatttttacaacaacgattaagaataggtgtaaatagtgcaact
gtgttgcaagcactgtcgtatgcttttatattaacgcgtcccagtattccagatgaaatt
ataagagagggcaagctgatgaatgataagttgttaaatgctaaggtaaaggataaggaa
gaagaaggtgatgatagtgataatacagttgagagtgaaaaaaatagtatcaagggagaa
gggaaagatgttaaaatagagaagaaggaggtttctgataatataaagaaggaaacagaa
aatttgggtaaagaatttgatttctattctttagttaaaacaattaagttaagaaatgag
aaaatgaataaaccaaatttattttttaacatagaaaaagtgggagatactcgtcttcta
ccaatatttaaggaattaaaaaaagcgtactgcgaagtaaatagcgattcggatattttt
gaatgtatggaaaaatctgttaaaagtgctttatgtgaattaccgaacattgaaattatc
attcagaatttattaaatggcgatgatatgaatatgttaagtaaaaaatgcaccgtcaaa
acaggagttcctgtgcaacccatgttagcaaaaccaacaaagggaatacaagaagtttta
gatagatttaacaatgtgacattcacatgcgaatataaatatgatggggaaagagcacaa
attcattatatagataaagataatataaaaatatttagtagaaatttagaaactatgact
gaaaagtatcctgatgttatacaaatagttagagatcaaatttcaagtggcgctactgaa
tgtattattgatagtgaagttgtagcgtacgatatagaaaataaaaagatattacctttt
caagttctaacaacaagaaaaagaaaagatgtagatattgaaaatataaaagtaaaagta
tgtctattcccctttgatttaatttgttgcaatggtgtatcagtaataaaggaaccatta
gaaattagaagaaaacttttgtactctttactaaaatgtaaggaaggaattttatcctat
gcaacacactctgaaatgaataatattgaagatattgatatatttttacaagatgcaatt
gaaaatagttgtgaaggtttaatggttaaaactctacttgataatgcttcctatgagcct
tctagaagatcactaaattggttaaaggtaaaaaaagattatattgaagggttatctgat
tcagttgatttagttccaatagctggttactatggaaaaggaaaaaggagtggagtttat
ggtgcatttgttttagctagttataattcagaaacagagaattttcaaacagtatgtaaa
gcaggtacaggttttagtgatgaaattctaaatacgttatatgatttattgaatgataaa
ataatacctaataaaaaatcgtattatgaggtttcagataagttaaacccagatgtttgg
tttgatgctcattacgtatgggaggtaaaagcagccgacttgtccttatctcctgtccac
actgcagctattggggtttattcagatgataagggaataggtttaagattccctagattt
cttagattgagagaagataaaaatgctgagcaagctacaactacgcagcaaattattgac
ttttacgaagctcagtttacgtctaataagaataaaaataatgatttcaatgaggatagt
gaaagtgaataa
DBGET
integrated database retrieval system
