KEGG   Plasmodium brasilianum: 92373835
Entry
92373835          CDS       T10352                                 
Symbol
MKS88_005748
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
pbrs  Plasmodium brasilianum
Pathway
pbrs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbrs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92373835 (MKS88_005748)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbrs03019]
    92373835 (MKS88_005748)
   03041 Spliceosome [BR:pbrs03041]
    92373835 (MKS88_005748)
Messenger RNA biogenesis [BR:pbrs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     92373835 (MKS88_005748)
Spliceosome [BR:pbrs03041]
 Complex B
  Other components
   Prp19-related factors
    92373835 (MKS88_005748)
 Complex C
    92373835 (MKS88_005748)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N HAT_Syf1_M TPR_2 HAT_PRP39_N BTB_SANBR TPR_ELP1
Other DBs
NCBI-GeneID: 92373835
NCBI-ProteinID: XP_067070954
LinkDB
Position
14:complement(2551356..2554975)
AA seq 1008 aa
MELYGELYDYDDLFFNENNVTSREEAFYEEKDYFVDEMNYSNKFINSYKNTENENYLKSI
EIDIKSNLEKVSTKYLFLYINKFKEKNIKKENNLYVLNMYDIHLKKDKLNVLETENNIVE
YCLTELINGGRKSNVKGGLKKGIMCYDSTVQLGCSHIGNEDDEEEHEQEKLGYEEEEQDY
DVGEVKARGYGKEQSSDEDENNSSNGSARTKEYYLRRIYQVVLKYFPFSFKLWYNYIRDS
IEMIKDVYYDNRREYEQVNAIFEKCLLYMYHFKSIYIMYIQFLYIQRKVQKIREVFNRSL
QNVFLNQHEDLWFYQLEYNEKINNKLINYEYIKRYITIYPEQVIFLFDHYVKYKMYKHAI
GTFFYILNCEEETLDLGNKSKYDLYKEIFNLISSAKVLNNDVMEILKKNINIFKNYENVT
SIFILLANNYVYEGRWNKAMDSYEEGISECYTVNDFSILFENYIETLKVLIDLKINQQEE
KRNTSTSDLYVEEEKEAIDNELISEGIKPNDDFVIDLYMEKINYLLDVRKIFIADIKLKN
NKNNVYIWLSKIDAVANDTDKVDLFNKCLIHFEHNEYIGRLSDVYISYAYYYYNRNKYDE
SVKVFHRAIKEKNFKNVNEMANIFCSWVELELLQANYKEALNVARLAIDIGRGKSFKGKA
ENGTTFNVHNTSRSGENDAISIYSRGLRDSTDGDVLAHTEFNLLNSTKLMCLILDMEINY
GTVETSISMFDVLYHAKSITVKMVLSFANFLYTHKYFNECFKIYEKAISIFHYPYLYPIY
ANYINKYIERYKDKNISYVRELFKQAIYGIDNKTYIPKEFAKYIFFMYALFEENYGFLKN
SLSIYKEAIPFLEEKDKATFYKMFIWKISKSYGVHKAREAFEEAIQTLKDDDAREICLLY
IDMEYKLNEYERVRALYIYTAQFTNPLAYSKFYQDWREFEALHGNEHTFRDMIRIKRSVL
SIFTSSHRGVKEIEKDENSNLNVIENTKRILQEMIENEERLQKKIKNG
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggaactgtacggagagttgtacgactatgatgatttattttttaacgagaacaatgtt
acctcgagggaggaagcgttttatgaagaaaaagattattttgtcgatgagatgaattac
agtaataagtttataaacagttacaaaaatacagaaaatgagaattatttgaaaagtatt
gaaatagatataaagagcaatttagaaaaagtgtctacaaaatacttatttttatatatt
aataaatttaaggaaaagaatataaagaaggaaaacaatttgtatgttttaaatatgtac
gatatacatttaaaaaaagataagctcaacgtgttggaaacagagaacaatatcgtggag
tactgtttgacagagttaataaatggaggtagaaagagtaacgtaaaggggggtctaaaa
aagggcatcatgtgttatgatagtactgtccagttagggtgttcacatattggaaatgag
gatgatgaggaggagcacgaacaggaaaagctaggttatgaggaggaagaacaggattat
gatgtgggtgaggttaaagcacgtgggtatggtaaagagcagagcagcgatgaagatgaa
aataacagtagcaatggcagtgcgcgcacgaaggagtactacttgcgcagaatttaccaa
gttgttctgaagtacttcccgttcagcttcaagctgtggtataactacataagagatagc
atagagatgataaaggatgtctattacgataacagaagagaatatgaacaagtgaatgcg
atttttgaaaagtgtctattatatatgtaccattttaagtccatctatattatgtacatt
caatttttatatattcaaaggaaagttcaaaagataagagaagtattcaatcgctcttta
cagaatgtttttttaaatcaacatgaagatttatggttttatcaattagaatataatgag
aaaataaacaataagttaattaattatgaatatattaaaagatatataacaatttatcct
gaacaagtcatatttttatttgatcattatgtaaaatataaaatgtataaacatgcaata
ggtacttttttttatatacttaattgtgaagaggagacgttagatttaggaaataaatca
aaatatgatttatataaagaaatatttaatttaattagttcagctaaagttttaaataat
gacgttatggaaattttgaaaaaaaatataaatatttttaaaaattatgaaaatgttaca
tctattttcattctattagcaaataattatgtgtacgagggtagatggaataaggctatg
gattcatatgaagaggggatatcagaatgttacacagttaatgacttttcaattcttttt
gaaaactacattgaaacgttgaaggtgttgatagatttgaaaataaatcaacaagaggaa
aaaaggaatactagcacaagtgatttatatgttgaagaggagaaagaagcaatagacaat
gaactaatttcagagggaataaaaccaaatgatgattttgtaatcgatttgtatatggaa
aaaataaactaccttttggatgtaaggaaaatatttatagctgatattaaactgaaaaac
aataaaaataatgtgtacatatggttaagcaaaattgatgcagttgcaaatgatactgat
aaagtagatctcttcaacaagtgtttaatacattttgagcataatgaatacatagggaga
ttgagtgatgtatatattagttatgcatactactattataacaggaacaaatatgacgaa
tctgtaaaggttttccatagagctataaaagaaaaaaatttcaaaaatgtcaacgaaatg
gcaaatatattttgctcatgggttgaactagaattactgcaagcaaattacaaggaagcg
ttgaatgtagccaggttggctattgatattggcagaggaaaatcctttaaagggaaagca
gaaaatggaactacatttaatgtgcacaatactagtagaagcggggaaaacgatgcaatc
agtatttacagtagaggtctacgggacagtactgatggcgatgtgctcgcacataccgag
tttaaccttctaaactcaaccaaattgatgtgcttaattcttgatatggaaataaattac
ggcacagttgaaacgtccataagcatgtttgatgttttgtatcatgcaaaaagtattact
gtgaaaatggttttgtcctttgctaattttctatacacacataaatactttaatgaatgt
tttaaaatttacgagaaagctatttctatatttcactacccttatttataccccatttat
gccaattatattaataaatacattgagagatataaagacaaaaatatttcatatgtgcgt
gaactgtttaaacaagctatttatggtattgacaacaaaacgtatattccaaaagaattt
gctaagtatatttttttcatgtatgctttatttgaagaaaattatggctttttgaagaat
tcactgagtatttataaagaggctattccctttctggaggaaaaggacaaagctacattt
tataagatgttcatttggaagatatccaaatcctatggagttcacaaagccagggaagca
tttgaggaggctattcaaacgctaaaggatgacgatgcgagagaaatttgtttgttatat
attgacatggaatataagttaaacgaatatgagcgtgtcagggcgctttacatttacacg
gctcagtttactaatccattggcctattcgaagttttaccaggattggagagaatttgaa
gcattgcatggaaacgagcacaccttcagagacatgataagaataaaaagaagcgtccta
agcatatttacgagttcgcacaggggagttaaggagatagaaaaagacgaaaactcgaac
ttgaacgtaatagaaaacacgaagaggatactgcaggaaatgattgaaaatgaagagagg
cttcaaaaaaaaattaaaaatggctaa

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