KEGG   Plasmodium brasilianum: 92373883
Entry
92373883          CDS       T10352                                 
Symbol
MKS88_005796
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pbrs  Plasmodium brasilianum
Pathway
pbrs03030  DNA replication
pbrs03410  Base excision repair
pbrs03420  Nucleotide excision repair
pbrs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pbrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    92373883 (MKS88_005796)
   03410 Base excision repair
    92373883 (MKS88_005796)
   03420 Nucleotide excision repair
    92373883 (MKS88_005796)
   03430 Mismatch repair
    92373883 (MKS88_005796)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbrs03032]
    92373883 (MKS88_005796)
   03036 Chromosome and associated proteins [BR:pbrs03036]
    92373883 (MKS88_005796)
   03400 DNA repair and recombination proteins [BR:pbrs03400]
    92373883 (MKS88_005796)
DNA replication proteins [BR:pbrs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    92373883 (MKS88_005796)
  DNA Replication Termination Factors
   ELG1-RFC complex
    92373883 (MKS88_005796)
Chromosome and associated proteins [BR:pbrs03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    92373883 (MKS88_005796)
DNA repair and recombination proteins [BR:pbrs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     92373883 (MKS88_005796)
  Check point factors
   HRAD17(Rad24)-RFC complex
    92373883 (MKS88_005796)
SSDB
Motif
Pfam: Mito_carr AAA DNA_pol3_delta2 Rep_fac_C RCF1-5-like_lid AAA_14 nSTAND_NTPase5 Viral_helicase1 AAA_lid_RFC1 AAA_22 Rad17 AAA_16 AAA_19 AAA_5 AAA_11 Mg_chelatase AAA_assoc_2 RuvB_N AAA_25 TPT AAA_7 AAA_3 AAA_24 FtsK_SpoIIIE NPHP3_N nSTAND3 MCM AAA_30 AAA_18 AAA_28 MeaB
Other DBs
NCBI-GeneID: 92373883
NCBI-ProteinID: XP_067071001
LinkDB
Position
14:<2786372..>2792834
AA seq 624 aa
MRNIQFEEVTLEISILFEINRYNRMSDVDNLITGAISGVIVDMVLYPIDNLKTKVQAKLP
FTIFETKNLYNGILPTLIGTAPASAFFYCFYELSKKLLTEKNENISKSKLYLISTTIAEI
ASCAVRLPFEIVKQKMQISTNRSMINTIYDISKTEGLFKFLFKSYLIMIVREIPFDYIQY
FLWETFKEKAKKGSQKEKDARREKLKNNISEKYPTITSSVCGGMAVVYNIINGCVNFKEI
VAFKEKKKVHIKKKIDFSIVPPDQIICIFANLNFKDKITSIQLGFNIMEEEDTFKNRLLK
RNIDIWIEKYRPEYLDDVVGNPFVINTLKSIVVSGNMPNLLLAGAPGTGKTTSILCLASE
MLGNQAKKAVLELNASDDRGINVIRDRIKSFAKEIISLPPGKHKIIILDEVDSMTTAAQQ
SLRRIMELYSDTTRFALACNQSEKIIDALQSRCAIIRYFKLTDDQVLKRILKICKYENIK
YTDDGLETLTFIADGDLRKAVNCLQSTYAGLEIINKENVLNICDIPSPERIENLLKYCIN
CEWKKAHDIAYDMIKEGHTPFDVALTSSNVLRRYDLGSEAVQIEFLKIGAMACNTMASGL
ASVIQLDKLLADWCIAAKTFRTKC
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgagaaacattcaatttgaggaagttacactcgagatttctattctctttgaaataaat
cgatacaacagaatgagcgatgtggataatttaataactggagctatatctggtgttatt
gttgatatggtgttatatccaattgataacttaaaaacaaaagttcaggccaaattaccc
tttacaatttttgaaacaaaaaatttgtataatgggattttaccaactctaataggtact
gcccctgctagcgcatttttttattgtttttatgaactgtccaaaaaattattaacagaa
aagaatgaaaatattagcaaaagtaaattgtatttaatttcaacaacaatagcggaaatt
gcatcttgtgcagtaaggctaccatttgagatagtgaaacagaaaatgcaaatttctact
aatagatctatgataaatacaatatatgatatttcaaaaacggaaggattgtttaaattt
ttgtttaaaagttatttaattatgatagtaagagaaattcccttcgactatattcaatac
tttctgtgggaaacatttaaggagaaggcaaaaaaaggtagtcaaaaagagaaagacgca
agaagagaaaaactaaaaaacaatatttctgaaaagtaccccactataacgtcttccgtg
tgtggcggaatggcagttgtatataatattataaatggttgtgtaaatttcaaagaaata
gtggcatttaaagaaaaaaaaaaagtacacattaaaaaaaaaattgacttttccattgtc
ccaccggatcaaataatttgcatttttgcgaatttgaattttaaggataaaattacaagt
atacagttagggtttaacataatggaggaagaagacacattcaaaaataggttactgaaa
agaaatattgatatatggattgaaaaatatcgaccagaatatttagatgatgtggtggga
aatccttttgttataaatactttaaagagcatagttgtgtcagggaatatgcctaactta
cttttagctggtgctccaggtacaggaaaaactacaagtattttatgcctagctagcgag
atgctgggtaaccaagctaaaaaagctgtacttgaactaaatgcgtcggacgatagaggt
attaatgtaataagagacagaataaaaagctttgctaaagaaattataagtttacctcca
ggaaagcacaaaataataattttagatgaagtagattcaatgacaactgcagctcagcag
tctttgagaagaatcatggaattgtattcagatactacgagatttgcattggcttgtaat
caatcagaaaaaataatagatgctctacaaagtaggtgtgccataattagatacttcaaa
ctaactgatgaccaggttttaaaaagaatattaaaaatatgtaaatatgaaaatataaaa
tacacagatgatgggttggaaacattgacctttattgcagatggtgatttaagaaaagct
gttaactgcttacagtcaacttatgcaggattagaaattataaataaagaaaatgtgtta
aatatttgtgatattccatcccctgaaagaattgaaaatttattaaaatattgtattaat
tgtgaatggaaaaaagcacatgatattgcttatgatatgattaaagaaggacacacacca
tttgatgtagcattaacgtcgtcaaatgttttaaggagatatgatcttggatctgaagct
gttcaaatagagttcttaaaaattggtgcaatggcatgtaatactatggccagtggatta
gctagtgtaatacaactggataaactgcttgcagattggtgtatagctgcaaaaacattt
agaaccaagtgttaa

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