Plasmodium brasilianum: 92373883
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Entry
92373883 CDS
T10352
Symbol
MKS88_005796
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03030
DNA replication
pbrs03410
Base excision repair
pbrs03420
Nucleotide excision repair
pbrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92373883 (MKS88_005796)
03410 Base excision repair
92373883 (MKS88_005796)
03420 Nucleotide excision repair
92373883 (MKS88_005796)
03430 Mismatch repair
92373883 (MKS88_005796)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbrs03032
]
92373883 (MKS88_005796)
03036 Chromosome and associated proteins [BR:
pbrs03036
]
92373883 (MKS88_005796)
03400 DNA repair and recombination proteins [BR:
pbrs03400
]
92373883 (MKS88_005796)
DNA replication proteins [BR:
pbrs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
92373883 (MKS88_005796)
DNA Replication Termination Factors
ELG1-RFC complex
92373883 (MKS88_005796)
Chromosome and associated proteins [BR:
pbrs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
92373883 (MKS88_005796)
DNA repair and recombination proteins [BR:
pbrs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
92373883 (MKS88_005796)
Check point factors
HRAD17(Rad24)-RFC complex
92373883 (MKS88_005796)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mito_carr
AAA
DNA_pol3_delta2
Rep_fac_C
RCF1-5-like_lid
AAA_14
nSTAND_NTPase5
Viral_helicase1
AAA_lid_RFC1
AAA_22
Rad17
AAA_16
AAA_19
AAA_5
AAA_11
Mg_chelatase
AAA_assoc_2
RuvB_N
AAA_25
TPT
AAA_7
AAA_3
AAA_24
FtsK_SpoIIIE
NPHP3_N
nSTAND3
MCM
AAA_30
AAA_18
AAA_28
MeaB
Motif
Other DBs
NCBI-GeneID:
92373883
NCBI-ProteinID:
XP_067071001
LinkDB
All DBs
Position
14:<2786372..>2792834
Genome browser
AA seq
624 aa
AA seq
DB search
MRNIQFEEVTLEISILFEINRYNRMSDVDNLITGAISGVIVDMVLYPIDNLKTKVQAKLP
FTIFETKNLYNGILPTLIGTAPASAFFYCFYELSKKLLTEKNENISKSKLYLISTTIAEI
ASCAVRLPFEIVKQKMQISTNRSMINTIYDISKTEGLFKFLFKSYLIMIVREIPFDYIQY
FLWETFKEKAKKGSQKEKDARREKLKNNISEKYPTITSSVCGGMAVVYNIINGCVNFKEI
VAFKEKKKVHIKKKIDFSIVPPDQIICIFANLNFKDKITSIQLGFNIMEEEDTFKNRLLK
RNIDIWIEKYRPEYLDDVVGNPFVINTLKSIVVSGNMPNLLLAGAPGTGKTTSILCLASE
MLGNQAKKAVLELNASDDRGINVIRDRIKSFAKEIISLPPGKHKIIILDEVDSMTTAAQQ
SLRRIMELYSDTTRFALACNQSEKIIDALQSRCAIIRYFKLTDDQVLKRILKICKYENIK
YTDDGLETLTFIADGDLRKAVNCLQSTYAGLEIINKENVLNICDIPSPERIENLLKYCIN
CEWKKAHDIAYDMIKEGHTPFDVALTSSNVLRRYDLGSEAVQIEFLKIGAMACNTMASGL
ASVIQLDKLLADWCIAAKTFRTKC
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacattcaatttgaggaagttacactcgagatttctattctctttgaaataaat
cgatacaacagaatgagcgatgtggataatttaataactggagctatatctggtgttatt
gttgatatggtgttatatccaattgataacttaaaaacaaaagttcaggccaaattaccc
tttacaatttttgaaacaaaaaatttgtataatgggattttaccaactctaataggtact
gcccctgctagcgcatttttttattgtttttatgaactgtccaaaaaattattaacagaa
aagaatgaaaatattagcaaaagtaaattgtatttaatttcaacaacaatagcggaaatt
gcatcttgtgcagtaaggctaccatttgagatagtgaaacagaaaatgcaaatttctact
aatagatctatgataaatacaatatatgatatttcaaaaacggaaggattgtttaaattt
ttgtttaaaagttatttaattatgatagtaagagaaattcccttcgactatattcaatac
tttctgtgggaaacatttaaggagaaggcaaaaaaaggtagtcaaaaagagaaagacgca
agaagagaaaaactaaaaaacaatatttctgaaaagtaccccactataacgtcttccgtg
tgtggcggaatggcagttgtatataatattataaatggttgtgtaaatttcaaagaaata
gtggcatttaaagaaaaaaaaaaagtacacattaaaaaaaaaattgacttttccattgtc
ccaccggatcaaataatttgcatttttgcgaatttgaattttaaggataaaattacaagt
atacagttagggtttaacataatggaggaagaagacacattcaaaaataggttactgaaa
agaaatattgatatatggattgaaaaatatcgaccagaatatttagatgatgtggtggga
aatccttttgttataaatactttaaagagcatagttgtgtcagggaatatgcctaactta
cttttagctggtgctccaggtacaggaaaaactacaagtattttatgcctagctagcgag
atgctgggtaaccaagctaaaaaagctgtacttgaactaaatgcgtcggacgatagaggt
attaatgtaataagagacagaataaaaagctttgctaaagaaattataagtttacctcca
ggaaagcacaaaataataattttagatgaagtagattcaatgacaactgcagctcagcag
tctttgagaagaatcatggaattgtattcagatactacgagatttgcattggcttgtaat
caatcagaaaaaataatagatgctctacaaagtaggtgtgccataattagatacttcaaa
ctaactgatgaccaggttttaaaaagaatattaaaaatatgtaaatatgaaaatataaaa
tacacagatgatgggttggaaacattgacctttattgcagatggtgatttaagaaaagct
gttaactgcttacagtcaacttatgcaggattagaaattataaataaagaaaatgtgtta
aatatttgtgatattccatcccctgaaagaattgaaaatttattaaaatattgtattaat
tgtgaatggaaaaaagcacatgatattgcttatgatatgattaaagaaggacacacacca
tttgatgtagcattaacgtcgtcaaatgttttaaggagatatgatcttggatctgaagct
gttcaaatagagttcttaaaaattggtgcaatggcatgtaatactatggccagtggatta
gctagtgtaatacaactggataaactgcttgcagattggtgtatagctgcaaaaacattt
agaaccaagtgttaa
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