Pendulispora brunnea: LZC95_00960
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Entry
LZC95_00960 CDS
T10972
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pbru Pendulispora brunnea
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbru03000
]
LZC95_00960 (rtcR)
Transcription factors [BR:
pbru03000
]
Prokaryotic type
Other transcription factors
Others
LZC95_00960 (rtcR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_16
AAA_22
NACHT
AAA_19
ATPase_2
AAA_2
AAA_30
AAA_18
MCM
AAA_14
NTPase_1
AAA_33
AAA_28
TsaE
T2SSE
AAA_7
AAA_29
TniB
Motif
Other DBs
NCBI-ProteinID:
WXA95410
LinkDB
All DBs
Position
228389..230017
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AA seq
542 aa
AA seq
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MDRKKLVVITLLGSTLDRGRGNGRWDRWRPTVALTQHEDLLIDRLELLYGKESYDLSDTV
ITDIRHASPETKVVGHIVNFEDAWDFERVYGTLHDFARAYPFDTDKEDYLVHITTGTHVA
QICLFLLTESRYFPARLLQTSPGKRKDGKDASPGTYAIIDLDLSKYDRLGSRFQKEKASG
QSFLKSGIDTRNRAFNELIERIEQVAIGSRAPILLTGPTGAGKSKLARRIFELKKARRQV
TGEFAEVNCATLRGDAAMSALFGHVKGAFTGAVANRPGLLRKAHQGVLFLDEVGELGADE
QAMLLRAIEEKVFYPMGSDREVTSDFQLITGTNRDLRARIAGGQFRDDLFARINLWTFRL
PALHERTEDIPPNLDFELEQISASLRVNITMSKEARERFLRFASKWTWPGNFRDFDAAVT
RMATLADGGRITERVVADEIERLRAGGSDGASPGNGAGDEKELIARALGAERAAHLDRFD
RVQLEDVLAVCAGTRSLSEAGRELFAHSRAERTSVNDSDRLRKYLARFGIEFSAFQQRLT
AR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaaaaagctcgtcgtcatcacccttttgggcagcacgctcgaccgcggccgc
ggaaatggccgctgggatcgctggcgcccgacggtggcccttacccagcacgaggacctg
ctcatcgatcggctcgagctcctgtacggcaaggagagttacgatctctcggacacggtg
atcacggatattcgccatgcttcgccagagacgaaggtggtcgggcacatcgtgaacttc
gaggatgcgtgggacttcgagcgcgtctacggtaccttgcacgactttgcacgggcgtac
cccttcgacacggacaaggaagattacctggtccacatcaccacgggcacgcacgtcgcg
cagatatgtctctttcttttgacggagtcgcgctatttcccggcgcgactcctccaaacg
tcgcccgggaagcgaaaggacggcaaggacgcgagccccggcacgtacgcgatcatcgat
ctcgatttgtccaagtacgaccggctcgggtcgcgctttcagaaagaaaaagcgtcgggg
cagtcgtttctcaaatcgggaatcgacacgcgcaaccgcgctttcaacgaattgatcgag
cgcatcgagcaggtggccatcggttcgcgcgcgcccattttgcttacggggccgacgggg
gcgggcaagagcaagctcgcacggcgcatcttcgagctgaaaaaggcacgaaggcaggtg
accggcgagttcgccgaggtcaactgcgcaaccttgcgcggggatgcggccatgagcgct
ctgttcggccacgtcaaaggggcgtttaccggcgccgtcgccaaccgccccggtttgctg
cgcaaggcgcatcaaggtgttctctttttggacgaggtgggcgagctcggtgccgacgag
caggcgatgcttctccgcgccatcgaggaaaaggtgttctatcccatgggctcggatcgg
gaggtcaccagcgattttcagctcatcacggggaccaatcgcgatttgcgcgcgcgcatt
gcgggaggccaatttcgcgacgatcttttcgcacgcatcaatttgtggaccttccgtctc
ccggccctgcacgagcggaccgaggacattccgccgaatctcgatttcgagctcgagcaa
atttccgcgagccttcgcgtgaacatcaccatgagcaaggaggcgcgtgagcgctttttg
cggtttgcttcgaaatggacgtggccgggcaattttcgcgacttcgatgcagcggtcacg
cgcatggccacgttggccgatggcggccgcatcaccgagcgcgtggtggccgacgagatc
gagcggctgcgggcaggcggctcggacggagccagcccgggcaacggcgccggcgatgaa
aaggagctgatcgcgcgcgccctcggtgccgaacgggcggcgcatctggatcggttcgat
cgcgtgcagctcgaggacgtgcttgccgtgtgcgcggggactcgctcgctgtcggaggcg
ggccgcgagcttttcgcccactcgcgtgccgagcgcaccagcgtgaacgattcggatcgt
ttacggaaatacctggcgcgcttcggcatcgagttttcggcctttcagcagcgtctcacc
gcacggtga
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