Pendulispora brunnea: LZC95_11435
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Entry
LZC95_11435 CDS
T10972
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbru Pendulispora brunnea
Pathway
pbru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LZC95_11435 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbru03019
]
LZC95_11435 (pnp)
03016 Transfer RNA biogenesis [BR:
pbru03016
]
LZC95_11435 (pnp)
Enzymes [BR:
pbru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LZC95_11435 (pnp)
Messenger RNA biogenesis [BR:
pbru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LZC95_11435 (pnp)
Transfer RNA biogenesis [BR:
pbru03016
]
Prokaryotic type
tRNA degradation factors
LZC95_11435 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
PCB_OB
KH_2
Peptidase_M20
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WXA97446
UniProt:
A0ABZ2KM62
LinkDB
All DBs
Position
complement(2798278..2800536)
Genome browser
AA seq
752 aa
AA seq
DB search
MSFVRESVIVNGRPLTIETGRLAKQAHGAVLLSYGESVVLVTAVSGDERPGLDFFPLTCE
YVEKTFAAGKIPGGFFKREGRQRDDEILTSRLIDRPCRPLFPEGFKKDTQIIATVLSSDK
INPTDVLAVTGASAALHISDIPWNGPLAGVRVARVHGEFIAFPTFEQQAQSDIDMVVACS
KDAIVMVEGGAAEANEGDVLDALWFAHQAAQPILELIERLRAAVGKEKRPFEAVKLDEKI
ASRVKALSDAGILESALIKEKKSRYDSYKSVKTKLTETLQAELGAETFTANEKLIKEEFE
ERKYHVVREYVLGQNKRIDGRAMDVIRPITTEVGLLPRVHGSALFQRGETQAVVTSTLGT
SADEQKIDALTGERWKRFMLHYNFPPFSTGETKPLRGPGRREVGHGALAERALSRMIPDQ
EKFPYTIRVVSETLESNGSSSMAAVCGGTLSLMDAGVPIKSPVAGIAMGLIADATPGPNQ
RTAILSDILGDEDHLGDMDFKVCGTERGITAIQMDIKIAGLSREIMQRALDQARAGRLFI
LGKMLESLTTPRTELSKYAPRITTVKVKPDQIRLIIGPGGKTIKGIIDQTGVAIDVEDDG
TVNVASSDSDAVKKALDIIKGLTAEPEVGVVYKGAVQRVTDFGAFVELLPGTDGLLHISE
MAHTRVERVTDVMKEGDIVEVKVLSIDRDGKIRLSRRELLPLPEGEEGERAKERMLAARE
SGGGPPPRRGGGGGDRGGPPRGGPRGGGDRRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgttcgtgaatcggtcatcgtcaacggccgtccactcaccatcgagacgggt
cgtctggccaagcaggctcacggcgccgttctcctcagctacggcgaaagcgtcgtcctc
gtcaccgccgtgtcgggcgacgagcgccccggcttggacttctttccgctgacctgcgag
tacgtcgagaagacgttcgccgccggcaaaatcccgggcggcttcttcaagcgcgaaggc
cggcagcgcgacgacgagattctgaccagccgcctcatcgaccgtccttgccgtcccctc
ttccccgagggcttcaagaaggacacgcagatcatcgcgaccgtcctcagctcggacaag
atcaacccgacggacgtgctcgcggtcaccggcgccagcgccgcactgcacatctccgac
atcccctggaacggccccctcgccggcgttcgcgtcgcacgcgttcacggtgagttcatc
gccttccccaccttcgagcagcaggcccagtcggacatcgacatggtggttgcgtgttcc
aaggacgccatcgtcatggtggagggcggcgccgccgaggccaacgaaggcgacgtcctc
gatgccctctggttcgcgcaccaggccgcgcaaccgatcctcgagctgatcgagcgcctg
cgcgccgcggttggcaaagagaagcgccccttcgaggcggtgaagctcgacgagaagatc
gcctcgcgcgtgaaggccctttccgacgcgggcatcctcgagtcggcgctcatcaaagag
aagaagagccgctacgactcgtacaagagcgtcaagacgaagctgaccgagacgctgcag
gcggaactcggagccgagacgttcacggcgaacgagaagctcatcaaagaggagttcgag
gagcgcaagtaccacgtcgtacgtgagtacgtcctcggacagaacaagcgcatcgacggc
cgtgcgatggacgtcatccgtcccatcaccaccgaggtgggcctgctcccgcgcgttcac
ggctcggcactcttccagcgcggtgaaacgcaggcggtggtcacgagcacgctcggcacc
agcgccgacgagcagaagatcgacgcgctcaccggcgaacgctggaagcgcttcatgctg
cactacaacttcccgcccttctccaccggcgagaccaagccgctccgcggccccggccgc
cgcgaagtcggccacggcgccctcgcggagcgtgcgctgtcgcgcatgattccggaccag
gagaagttcccctacacgatccgcgtcgtctcggagaccctcgagtcgaacggctcgtcg
tcgatggccgcggtgtgcggcggcaccctctcgctgatggacgcgggtgttcccatcaag
tcaccggtcgccggcatcgcgatgggcctcatcgccgatgcgacaccgggccccaaccag
cgcacggccatcctgagcgacatcctcggtgacgaggaccacctcggcgacatggacttc
aaggtctgcggcaccgagcgcggtatcaccgccatccagatggacatcaagattgcgggc
ctctcgcgcgagatcatgcagcgcgcgctcgatcaggcgcgtgcgggtcgcttgttcatc
ctgggcaagatgctcgaatcgctcaccacgccgcgtacggagctgtcgaagtacgcgccg
cgcatcaccacggtgaaggtgaagccggatcagatccgtctgatcatcggcccgggcggc
aagaccatcaagggcatcatcgaccagaccggcgtcgccatcgacgtggaagacgacggc
accgtgaacgtcgcttcgagcgattccgacgcggtgaagaaggcgctcgacatcatcaag
ggcctcaccgccgagccggaagtgggcgtggtctacaagggcgccgtgcagcgcgtgacc
gacttcggcgcgttcgtcgagttgctcccgggcaccgacggcctgctccacatctccgag
atggcgcacacccgcgtggagcgcgtcaccgacgtgatgaaagagggcgacatcgtcgag
gtgaaggttctctccatcgaccgcgacggcaaaatccgcctctcgcgtcgcgagctcctc
ccgctccccgagggcgaagagggcgagcgcgccaaggagcgcatgctggccgcccgcgaa
agcggcggtggcccgcccccgcgccgtggtggtggcggcggtgatcgcggcggcccgccc
cgcggcggtccccgtggtggcggcgaccgacgccggtaa
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