Pendulispora brunnea: LZC95_12940
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Entry
LZC95_12940 CDS
T10972
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pbru Pendulispora brunnea
Pathway
pbru02020
Two-component system
pbru02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZC95_12940
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LZC95_12940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbru03021
]
LZC95_12940
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pbru02035
]
LZC95_12940
Transcription machinery [BR:
pbru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LZC95_12940
Bacterial motility proteins [BR:
pbru02035
]
Flagellar system
Flagellar assembly proteins
Stator
LZC95_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WXA97737
UniProt:
A0ABZ2KGG3
LinkDB
All DBs
Position
complement(3175684..3176427)
Genome browser
AA seq
247 aa
AA seq
DB search
MPESPAPKAPTSPVKAAADSPEVHARVLEGISLVTTLARQMHQHLGASLSIDDLEAIGRE
GLLDSARTFDRERGIPFLRWASLRIRGAMIDGARSHGSLPRRVYRKLRALEAADRVQEVV
AEELAATPPNDPEAADEKLGEALSGMALAMAAAFLSPQTHGLDEIIHPDTESPEEEFAHA
ELMNRVRDAISKRPENERTLLERHYFDGITFEQAAQEIGLSKSWASRLHARAIEAISREL
KRTGIKD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagagccctgctccgaaagcgcccacatctccggtcaaggcggccgccgattct
cccgaggtgcatgcgcgcgtcctcgagggtatttcgctcgtcacgaccctggcgcgccaa
atgcaccaacacctcggcgccagcttgagcatcgacgacctcgaggccatcggccgcgag
ggattgctcgactcggcccgcaccttcgaccgcgagcggggcatcccgttcttgcgctgg
gcgagcctgcgcatccgcggtgcgatgatcgacggcgcccgttcccacggctcgcttccg
cggcgcgtctaccgcaagctccgcgcgttggaggcggccgaccgggtgcaggaggtcgtg
gccgaggaattggccgctaccccgcccaacgaccccgaggcggccgatgaaaaattgggc
gaggccctgtcgggcatggccctggccatggcggcggccttcctgtcgccccaaacgcac
ggtctggacgagatcatccacccggacaccgagtcgccggaggaggagttcgcccacgcc
gagctcatgaaccgggttcgcgacgcgatttcgaagcgtcccgagaacgagcgcaccctg
ctcgagcggcactacttcgacgggatcaccttcgagcaggccgcccaggaaattgggctg
tccaagtcgtgggcgagccgcctgcacgcccgggccatcgaggccatctcgcgggaactg
aaacggaccggcattaaagattga
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