Pendulispora brunnea: LZC95_13160
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Entry
LZC95_13160 CDS
T10972
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pbru Pendulispora brunnea
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbru03032
]
LZC95_13160
Enzymes [BR:
pbru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LZC95_13160
DNA replication proteins [BR:
pbru03032
]
Prokaryotic type
DNA Topoisomerases
LZC95_13160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
DEAD
Helicase_C
Toprim
RecQ_Zn_bind
ResIII
HTH_20
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
WXA97779
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All DBs
Position
3232957..3236715
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AA seq
1252 aa
AA seq
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MIAVLAEKPAVARDLARVLGATSRGEGFLRGGNYVVTWAVGHLVALAEPHQIDDRWRSWR
LADLPMLPKDWPLTVLEGTRDQFEVVRGILNSREVDGVVCATDAGREGELIFRYVYEAAK
CRKPVKRLWLSSLTPDAISRAFRELRPGAAFDSLARAARARSRADWLVGMNLSRAYTVTH
DVLYSVGRVQTPTLAMVVARELEIRAFVPEDYLEIVATFGKADADIDYRGLLFKVVQATE
GDRAKPKREAVRLPPDGAEAERILERVRGGEARVESVERENHAMPPPRLYDLTELQRHAN
RLFGMSAQRTLDVAQALYERWKLISYPRTDSRALSSSVAATLRGIVDAIAPAYEGLLAPG
TGQRPLGRRFVDDAAVTDHHAIIPTTVVADRDALSREEANIYDLVCRRLLAAWHEDHRYA
TTTVVTAVKSAENVDRFMTTGTSVEQVGWKVLDRKGTRPAKEEQAPTVPPGLAQGMAVSV
EKVEAKPGRTRPPDRYTDATLLTAMESAGRTIEDKELSEAMRESGLGTPATRAATIETLL
AREYLERDKKVLHATDRGIALVEAVHPRVKSPVLTGEWERELRRMERGEGDFERFMQGIE
AFVTEVTGKVRAAGPSPDRNPSPTPNLNLNPNLNLNPNLNPNPTPTPTRNPTPNRSPRSR
ELPALLRDVFGFGAFRPYQEEVCRTATSGKDVLLVMPTGSGKSLCYQLPGLARGGTTLVI
SPLIALMEDQVAKLKALGLAAERIHSGRDREASRSACRAYLDGALDFLFIAPERLRVPGF
PEMLARRKPALIAVDEAHCISHWGHDFRPDYRLLGERLPLLRPAPVMALTATATPLVQED
IATQLGLTSHAAFIHGFRRTNLAIEVIEKNPKDRTAAVAKLLAKPARRPAILYAPTRKDT
EALAKTLARSAGFPVAAYHAGLPPADRAKVQTAFLGGKLEAVVATIAFGMGIDKPDVRTV
IHTALPASLEGYYQEIGRAGRDGKPSRAVLFGSFVDRKMHEFFLDRDYPPLDIVQRLFDA
LAEGPRPKAWLATQVPETQFEKALDKLCAQGAAILEADDTVRRGKGGWERAYEAQRKHRA
AQIEAMHRYTEKHVCRMLQLVRHFGDEQDDGEVCGLCDVCAPKDAIAARFREPTAAEQRA
AERVLDALRQRDGLTVGQIHREVFASSKSMDRSSLEHVVGGLARAGLVSLADDSFEKDGE
TIAFQRVHLVGRAPGPPAWEVRAAPTRTAPTRVAARKKRSKKKGRRPPRRPP
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgtgctggcggaaaagcctgccgtcgcgcgggatctggcgcgtgtgctcggg
gcaacgtcgcgcggcgagggcttcctgcggggcggcaactacgtggtgacgtgggcggtg
ggccatttggtcgcgctcgccgagccgcatcaaatcgatgaccgatggcgctcgtggcga
ttggccgatctgcccatgctgccgaaggactggccgctgacggtgctggagggcacgcgc
gatcagttcgaggtggtgcggggcattctcaactcgcgcgaggtcgacggcgtggtgtgc
gccaccgacgcggggcgcgagggggagctcattttccgatacgtgtacgaggcggcgaaa
tgccgcaagccggtgaagcggctatggctttcgtcgctcacgccggatgccatctcgcgg
gcgtttcgcgagttgaggccgggggcggcgttcgattcgctggcgcgggctgcgcgggcg
cggagccgggccgactggctcgtgggcatgaatctgtcgcgggcgtacacggtgacgcac
gatgttctgtattccgtggggcgggtgcagacgccgacgttggccatggtggtggcgcgc
gagctggagattcgcgcgttcgtgcccgaggattacctggaaatcgtggccacgttcggg
aaggcggacgcggacatcgactaccgcgggctgctgttcaaggtggtgcaggccacggaa
ggggatcgggcgaagccgaaacgcgaggcggtgcggttgccgcccgacggggcggaggcc
gagcggatcctcgagcgcgtgcgcggtggcgaggcgcgggtcgagtcggtggagcgcgag
aaccacgcgatgcccccgccgcggttgtacgatctgacggagctgcagcgccacgcgaac
cggcttttcggcatgagcgcgcaacgtacgctcgatgtggcgcaggcgctttacgagcgg
tggaagttgattagctatccgcgaacggacagtcgggccctttcgagctcggtcgccgcg
acgctgcgcgggatcgtggacgcgattgcccccgcgtacgaaggcctgctggcaccgggc
acggggcagcgtccgctgggccggcgtttcgtggacgatgcggcggtgaccgatcaccac
gcgatcattccgacgacggtggtggcggatcgcgatgcgttgtcgcgggaggaggcgaac
atttacgatttggtttgccggcggctgctcgcggcatggcacgaggatcatcggtacgcg
acgacgacggtggtgacggcggtgaagtccgccgagaacgtggatcgcttcatgacgacg
ggaacgtcggtggagcaggtcggatggaaggtgctcgatcgcaaggggacgaggcctgca
aaagaggagcaggcgccgacggtgccgccggggctggcgcagggcatggcggtgtccgtg
gagaaggtggaggcaaagcccggaaggacgcggccgccggaccgctacaccgacgcgacg
ttgttgacggcgatggagagcgcaggccgcacgatcgaggacaaggagctgtccgaggcg
atgcgcgagtccgggctgggcacccccgcgacgcgggcggcaacgatcgagacgctgctt
gcgcgcgagtacctcgaacgggacaagaaggtactccacgcaacggatcgcgggattgcg
ctggtggaggcggtgcatccgcgggtgaagagtcccgtgctcacgggggagtgggagcgg
gagctgcggcggatggagagaggggaaggcgatttcgagaggttcatgcagggcatcgaa
gctttcgtgaccgaggtgacgggcaaggtccgggccgcgggcccgagtccggatcggaat
ccgagtccgactccgaatctgaatctgaatccgaatctgaatctgaatccgaatctgaat
ccgaatccgactccgactccgactcggaatccgaccccgaaccggagtccccggtcgagg
gagcttccggcgctgctgcgcgacgtgttcggcttcggagcatttcgcccgtaccaggag
gaggtctgccgaacggcgacgtcgggcaaagacgtcctcctcgtcatgcccaccggatcg
ggaaagtcgctttgttaccaattgcccgggttggcgcggggcgggacgacgttggtcatc
agcccgctgattgccctgatggaagaccaagtcgcgaagttgaaagcgctcggcctcgcg
gcggagcggatccactcggggcgcgatcgggaggcatcgcggagtgcgtgccgggcgtat
ttggatggcgcgctcgactttctcttcattgcgcccgaaaggctgcgcgtgcccggtttt
ccggagatgctcgcgcggcgaaagcccgcactcatcgccgtggacgaggcgcattgtatt
tcgcattggggccacgattttcggccggattatcggctgttgggggagcgattgcccctt
ttgcgtcctgcccccgtgatggccctcaccgcgacggcgacaccgctggtgcaagaggat
atcgcgacccaattggggctgacgtcgcacgcggcgttcattcacggctttcggcgaacg
aacctggccatcgaggtcatcgaaaagaaccccaaggaccgcacagccgccgtggcaaag
ctcctcgccaagcctgcccggcgacccgcgattctgtacgcgcccacccgcaaggacacc
gaggcgctcgcgaaaacccttgcgcgatcggcaggatttcccgtggctgcgtaccacgcg
ggcctgccccccgccgatcgcgcgaaggtgcagaccgcgtttctcgggggcaaactcgag
gccgtggtcgcgaccattgcctttggcatgggcatcgacaagccggacgtgcgaaccgtc
atccacacggcccttccggcgtccctcgaaggctattaccaggagataggccgcgcgggg
cgcgatggaaagccatcgcgcgcggtcttgttcgggtcgttcgtcgaccgcaagatgcac
gagttcttcctcgatcgcgattaccccccgctcgacatcgtgcaacgcctcttcgatgcg
ctggccgaggggccgcggccgaaggcgtggctcgcgacgcaggtgcccgagacgcagttc
gagaaggcgctggacaaattgtgcgcgcagggcgcggcgatcctcgaggccgacgacacc
gtgcggcggggcaagggcggctgggagcgcgcgtacgaagcgcagcgaaagcaccgcgcg
gcgcagatcgaggcgatgcatcggtacacggagaagcacgtttgccgcatgctgcagctg
gtccgccacttcggcgacgagcaggacgacggcgaggtgtgcgggctctgcgacgtctgc
gccccgaaggacgcgattgcggcccgctttcgcgagcccacggccgccgagcagcgcgcg
gcggagcgcgtgctggacgccttgcgccagcgcgatggtctcaccgtcgggcagatccat
cgcgaggtctttgcctcgagcaagtcgatggaccgctcctcgttggagcacgtcgtgggc
gggcttgcgcgcgcgggcttggtttccctggccgacgactcgttcgagaaagatggagag
accattgccttccagcgcgtgcacctcgtgggccgcgcgccggggccgccggcgtgggag
gtgcgcgccgcgccaacgcgtacggccccaacacgcgtggccgcacgcaagaagcgcagc
aagaagaagggacggcggcctccgcgacggccgccctaa
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