Pendulispora brunnea: LZC95_24515
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Entry
LZC95_24515 CDS
T10972
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
pbru Pendulispora brunnea
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pbru02048
]
LZC95_24515
Enzymes [BR:
pbru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
LZC95_24515
Prokaryotic defense system [BR:
pbru02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
LZC95_24515
Subtype I-B factors
LZC95_24515
Subtype I-C factors
LZC95_24515
Subtype I-D factors
LZC95_24515
Type II CRISPR-Cas system
Subtype II-B factors
LZC95_24515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WXA99966
UniProt:
A0ABZ2KUH2
LinkDB
All DBs
Position
complement(6348614..6352120)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSDLFGTLRKPLTDATARQRIREDLDTTLVVEAAAGTGKTTELVGRVLALVRKGRARLSG
IVAVTFTEKAAGEMKLRLRTEIENARQNKTAEAVTGSERANLDASLAELEAAHIGTIHGF
CADLLRERPVEACVDPLFEVADDDGKQRILRDCFEPWFERQLASPSLSVERVLRRRSRDR
DAVGPRHVLSNAVSALIEQRDFDTPWEHVPFDRRTAIDELLVELRALGDLAPRADYKDSW
LAKSFAEIARYVGEADRREAVRGERDYDGLEAELRTLSRQKLWGWKGSGRWYTKGLERQQ
VLDDRARTHEKLKAVLERADADLAAGLREELWPLVAEYEARKRSAGKLDFLDLLLLTRNL
LRDHLDVRKELQSRFSHLLVDEFQDTDPLQAEILLLLAADDPAESDPMRIKPVPGKLFVV
GDPKQSIYRFRRADVALYESIKRRLAEAGADVLHLSTSFRSVPSIQKAINATFAPLMQGN
ARGSQATYVALEPFREDSKKAPMPGVVALPVPRPWGDYGKIVNFKIDDSFPDAVAAFIDH
LLNESGWTIAEKEGGRAVPLEARHVCLLFKRLQNFGADVTRPYVRALEARRIPHVLVGGR
SYHAREEVVAIVNALCAIEWPDDELSVFATLRGPFFSLGDDALLAFRHRIRGDLNPFRRV
EPELLTDLTRPVRDAMLLLAHLHRRRNRRPIADTIVHVLEATRAHAGIAIWPTGEQALAN
VLRVLDIARRFESRGATSFRSFVEYMKDEAERGGVSEAPVVEEGTDGVRIMTVHRAKGLE
FPVVILADPTAKPTLSEPSRYVDASRRLWAMPLAGASPHELLVNRDEVLEQDGEEAMRLL
YVAATRAREMLVVPVLGDEVPGDFWTSALNPAIYPPEDARRHPEAAPGCPEFGPDSVRER
PDSARRDVHEAVKPGLHRPMAGEHSVVWWDPNALGLDKHHDVGLRQQRILEADKAGVVAE
AGERLHALWRRERDEAIAKGKTPSRVVRTVTEVSHGEGTPTAPSADRVELLVTTGGRREG
RPRGKRFGVLVHATFAAVDLTAGPDAVAKVARIQARLVGASGAEIEAATVAVVAALAHPI
FDRARAAVECRRESPILCHMADGALLEGVLDLAFRERDEHGHIWTVVDYKTDAEIAERVR
EYEAQVLLYAQAIAESTHERARGVLLSV
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttttcggcacacttcgcaagccgctcaccgacgcaacggcgcgccagcgt
atccgcgaggacctcgacacgacgttggtcgtggaggcggccgcgggaacggggaagacc
acggagctcgtggggcgcgtgctcgcgctggtgcgaaaagggcgcgcacggctctcgggc
atcgtggccgtcacgttcaccgaaaaggcggccggcgagatgaagctgcggctgcgcacg
gaaatcgagaacgcgcggcagaacaagacggccgaagcggtgaccggttcggagcgggcc
aacctggatgcgtcgctggccgagctcgaggccgcgcacattggaacgatccacggcttc
tgcgcggaccttttgcgcgagcgccccgtggaggcatgcgtcgaccctctgttcgaggtg
gcggacgacgacggcaagcagcgcatcctgcgcgattgcttcgaaccatggttcgagcgt
caattggcctcgccatcgctgtcggtggagcgggtcctgcgccggcgctcccgcgatcgc
gatgccgtcggcccgcgccacgtgctctccaacgccgtctcggcgctcatcgagcaacgc
gacttcgacacaccctgggagcatgtaccgttcgaccgccgcacggccatcgacgagctt
ctcgtcgagctgcgcgcgctcggagatctcgcaccgcgtgcagactacaaggattcctgg
ctggccaagagcttcgccgagatcgcacggtacgtgggcgaagccgatcgccgcgaggcc
gtgcgcggtgagcgcgactacgacggcctcgaagccgagctgcgcaccttgagccggcaa
aagctctggggctggaagggcagcggcaggtggtacaccaagggcctcgaacgccagcag
gtgctcgacgatcgggcgcgcacgcacgagaagttgaaagcggtgctcgagcgcgccgat
gccgatctcgcggcgggcctgcgtgaggaactatggccgctcgtggccgagtacgaggcg
cgcaagcggagcgcagggaagcttgattttctggatttgctgctcctgacccgcaacctt
ttgcgcgaccacctggacgtgcgcaaggagcttcagtcgcggttttcgcatcttctggtg
gacgaatttcaggacaccgatccgctgcaggcggagatcctgttgctgctggcggcggac
gatccggccgagagcgatccgatgcggatcaaaccggtgccgggcaagttgttcgtggtc
ggcgatcccaagcagtcgatttaccgattccggcgcgccgacgtggcgctgtacgagagc
atcaaacggcgcctggccgaggcgggggccgacgtgctgcatttgtcgacgagctttcgc
agcgtgccctcgattcaaaaggccatcaatgcgaccttcgccccgctgatgcagggaaac
gcgcgcggttcgcaggcgacgtacgtggcgctggagccgtttcgcgaggacagcaagaag
gcaccgatgcccggggtggtggcccttccggtgccgcggccttggggcgactacggaaag
atcgtcaatttcaaaatcgacgattcgttccccgatgccgtggcggcgttcatcgatcat
ctgttgaacgaaagcgggtggaccatcgccgagaaagaaggcgggcgtgcggtgccgctg
gaagctcggcacgtgtgcctcttgttcaagcggctgcagaacttcggcgcggacgtgacg
cggccctacgtgcgggcgctggaagcgcggcgcattccgcacgtcctcgtgggcggccgc
tcgtaccacgcgcgcgaggaagtcgtggccatcgtgaatgccctctgcgcgatcgagtgg
ccggacgacgagctatccgtgttcgcgaccttgcgcggcccgtttttttcgttgggcgat
gatgcgctgctggcctttcgacaccgcatccggggcgacttgaacccgttccggcgcgtg
gagccggagctgctgacggatctgacgcggcccgtgcgcgatgcgatgttgctcttggcg
catcttcaccgccggcgcaaccggcggcccattgcggacaccatcgtgcacgtgctggag
gccacgcgggcgcacgcgggcattgccatttggccgacgggcgagcaggcgctggccaac
gtgctgcgcgtgctcgacatcgcgcggcggttcgaatcgcgcggggcgacgtcctttcgg
tccttcgtcgaatacatgaaagacgaggccgagcgcggaggcgtttcggaggcgcccgtg
gtggaggaggggaccgacggcgtgcgcatcatgacggtgcaccgcgcgaagggcctcgag
ttcccggtggtcattctggcggatcccacggccaagccgaccttgtccgagccatcgcgc
tacgtcgatgcgtcacggcggttgtgggccatgccgctcgcgggggcatcgccgcacgag
cttctggtgaaccgcgacgaggtgctcgagcaagacggcgaggaggcgatgcggctgctc
tacgttgcggcaacgcgtgcgcgggagatgctcgtggtgcccgtgctcggggacgaggtg
cccggggatttttggaccagcgcattgaatcccgcgatttacccgccggaagatgcgcgg
cggcaccccgaagcggcgccgggttgtccggagttcgggcccgacagcgtgcgcgagcgg
ccggacagcgcacgccgtgacgtgcacgaggcggtgaagccggggttgcatcggccgatg
gccggagagcactccgtggtgtggtgggatccgaatgcgctggggctcgacaagcaccac
gacgtcgggcttcggcagcaacgaatcttggaggccgacaaagcgggcgtggtcgccgaa
gcaggcgaaaggctgcacgcactctggcgaagggagagggacgaggcgatcgccaagggc
aagacgccgtcgcgggtggtgcggacggtgacggaggtctcgcacggagaaggcaccccc
acggctcccagcgcagaccgcgtggagctcctcgtcaccacgggaggccgccgggaaggc
cggccccgcggaaagcgattcggcgtattggtgcacgccacttttgcggcggtggacttg
acggccggaccggacgcggtggcgaaggtcgcgcgcatccaggcgcggctcgtgggggcg
agcggcgcggagatcgaggcggccaccgtggccgtggtggccgcgctcgcgcatcccatc
ttcgaccgggcgcgcgcggccgtggagtgccggcgggagtcgccgatcctctgccacatg
gccgatggtgccctgctggagggcgtgctcgacttggcgttccgcgagcgggacgagcac
ggccacatctggaccgtggtcgactacaagacggacgccgagatcgcggagcgggttcgc
gagtacgaggcgcaggtgctcctgtacgcccaggcgattgccgaatcgacccacgaacgc
gcgcgcggcgttctgctctcggtgtag
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