Pendulispora brunnea: LZC95_27080
Help
Entry
LZC95_27080 CDS
T10972
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbru Pendulispora brunnea
Pathway
pbru00260
Glycine, serine and threonine metabolism
pbru00460
Cyanoamino acid metabolism
pbru00630
Glyoxylate and dicarboxylate metabolism
pbru00670
One carbon pool by folate
pbru00680
Methane metabolism
pbru01100
Metabolic pathways
pbru01110
Biosynthesis of secondary metabolites
pbru01120
Microbial metabolism in diverse environments
pbru01200
Carbon metabolism
pbru01230
Biosynthesis of amino acids
pbru01240
Biosynthesis of cofactors
pbru04981
Folate transport and metabolism
Module
pbru_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LZC95_27080
09102 Energy metabolism
00680 Methane metabolism
LZC95_27080
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LZC95_27080
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LZC95_27080
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LZC95_27080
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LZC95_27080
Enzymes [BR:
pbru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LZC95_27080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
WXB00230
LinkDB
All DBs
Position
6990521..6991843
Genome browser
AA seq
440 aa
AA seq
DB search
MSSAILLHRDLTEVDSEIAAELAGEARRQRTTLAMIASENYTAAAVMQAQGSLFMNKLAE
GYAGRRYCDGCQHIDAIENLAVQRAKALFGAEHANVQPHSGAQANAAAYDALLDAGDTIL
AMDLAHGGHLTHGMRLNFLAKCYRFVNYHVRRGDSRVDMAEVAQLARQHRPKLIVAGWSA
YPRHLDFEAFREIADEVGAYLLVDMAHFAGLVAAGLHPNPVPWSDVVTTTTHKTLGGPRG
GMILCKQKFANKIDTGVFPGQQAAPLAHTITAKAVALKIAGSEAFRDAQRRTVEGARIIA
ERLMRPDLVAGGVKILSGGTDVHLLLVDLREAGTTGKKAEERLGEIGISVNRNAVPFDPR
PPMVTSGLRIGTAALATRGFVTRDFQAVADVISEALLSPDDADSVPGLRSRVAALADAHP
IYGQEIKDLPRANFFESRNT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagcaatcctactccatcgtgacctcaccgaagtcgactccgaaatcgccgcc
gagctcgcgggcgaagcacgccgccagcgaacgacgctcgccatgatcgcatccgagaac
tacacggccgccgccgtgatgcaggctcagggctcgctgttcatgaacaagctcgcagaa
ggttacgcagggcggcgctattgcgacgggtgtcagcatattgatgcgatcgaaaatctg
gccgtgcagcgcgcgaaggcattgtttggcgccgagcacgcgaatgtgcagccgcactcc
ggcgcccaggccaacgccgcggcctacgacgcgctgctcgatgcgggagacaccatcctc
gccatggatctcgcgcacgggggacacctcacccacggcatgcgcctgaattttctggcc
aagtgttatcgcttcgtcaattaccacgtgcgccgcggggactcgcgggtggacatggcg
gaggtcgcccagctcgcccgccaacatcgccccaagctgattgtcgccggttggtcggcc
tatccgcgccatctcgacttcgaggccttccgagaaatcgctgacgaggtgggcgcttat
ctgctggtggacatggcgcacttcgccggcctggtcgcggccggcctgcacccgaacccc
gtcccgtggtccgacgtggtcacgacgaccacgcacaagaccctcggaggtccgcgcggc
ggtatgatcctgtgcaagcaaaagttcgccaacaaaatcgatactggcgtctttcccggt
cagcaggcggccccgctggcgcacaccatcaccgcgaaggcggttgcgctcaagatcgcg
ggcagcgaagcattccgcgatgcgcagcgccgcacggtcgagggcgcgcgcatcatcgcc
gagcgactgatgcggcccgatctcgtggcgggcggggtcaagatcctcagcggtggcacc
gatgttcacctgttgctggtcgacctgcgcgaggccggtaccaccgggaagaaggccgaa
gagcggctcggcgaaatcggcatttcggtaaatcgcaacgcggtgccgttcgatccgcgg
ccgccgatggtcacctccggtctgcgcattggcaccgcggcgctggccacccgcggattc
gtaacccgggacttccaggccgtcgccgacgtgatttctgaagcgttgctgtcgcccgac
gatgccgattccgtgccggggctacgaagccgagtggcggcccttgccgacgcgcatccg
atctacggacaggagatcaaggaccttccgcgggcgaacttcttcgagtcgcgcaataca
tga
DBGET
integrated database retrieval system