Pendulispora brunnea: LZC95_30935
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Entry
LZC95_30935 CDS
T10972
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbru Pendulispora brunnea
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbru03032
]
LZC95_30935 (topA)
03400 DNA repair and recombination proteins [BR:
pbru03400
]
LZC95_30935 (topA)
Enzymes [BR:
pbru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LZC95_30935 (topA)
DNA replication proteins [BR:
pbru03032
]
Prokaryotic type
DNA Topoisomerases
LZC95_30935 (topA)
DNA repair and recombination proteins [BR:
pbru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LZC95_30935 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WXA90857
LinkDB
All DBs
Position
7883727..7886240
Genome browser
AA seq
837 aa
AA seq
DB search
MAKTLVVVESPAKAKTIKKYLGATYEVVASKGHVKDLPKKLGIDIEKGFEETYEVIAGKE
KVLAELKSAAKNVEEVLLATDPDREGEAIAWHLAEELGGSKKVTKRVEFHEITKAGVQRG
VDHPRELNKPLYDAQRARRVLDRIVGYDVSALVWSKLAFGLSAGRVQSVALRLIVDRERE
IEAFVPVEYWNTSVGLAKAAGAKTPFISRLTSRDGKKFAVENAENADVVRGHLKSAAYTI
SKITRSERKRKAPAPYTTSKLQQDAVNRLGFGAKRTMQVAQGLYEGVDLGKDGGPVGLIT
YMRTDSTRLSPEAVAACRDRIEQVYGKEYLPANPPVFKSKKGAQDAHEAIRPTSLELSPE
TVRKHLKEEQFKLYKLIWDRFVACQMKEAVYDQTGVDIEAAVSGGPTYGLRASGRVLKFP
GWLAAVGEGGGKGELAGEEEADEAAKAAALKPDAEAASDDEASLPELSEGEKLKIVDPPG
VLTEQKFTQPPPRYNEGSLVRELEDRGIGRPSTYAEIISKVQARDYVEKLDGRFRPTTLG
MYVVDGLVRSELDFMDPAFTSSMEAELDEVEAGNEDRVVLLSRFYKRFRKQLDEGKKQKR
WNPEPEPTGEICDVCNEGEMMKRWSKNGWFLGCANYPKCKNTRDLGPDGKGTQVRETDVI
CDKCSKPMVIRSGRYGEFLSCTGYPGCKNAKPVPLGVPCPKCGGDLIEVRPKKKGGKTFY
GCSNYNHETLKCDFKLWQKPIQSPCPDCGAAFLVMGGTKAKPMIACANKECGYKRSPDAP
EPEVTTSVTTNANGSVSGEPPAANAEEEVASKTRPSGAANKLSSADGVAVARAVSQS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacgctcgtagtcgtcgagtcgcccgccaaggcgaagacgatcaagaagtat
ctgggggctacctacgaggtcgtcgcatcgaagggccacgttaaggatctacccaagaag
ctgggcatcgacatcgagaagggtttcgaagaaacctacgaggtcatcgccggcaaggaa
aaggtcctggccgagctgaagagtgccgcgaagaacgtcgaagaagtcctgctcgcaacc
gaccccgaccgagagggcgaagcgattgcgtggcacttggccgaggagttgggcggcagc
aagaaggtcacgaagcgcgtcgagtttcacgagatcacgaaggccggcgttcaacgcggc
gtcgatcatccgcgtgagctcaacaagccgctctacgatgcgcagcgcgcacgccgcgtt
ctcgatcgcatcgtgggctacgacgtgtcggcgctggtgtggtccaagctggcgttcggg
ttgagcgcaggccgcgtgcagagcgtggcgctccggctcatcgtcgatcgcgagcgcgaa
atcgaagccttcgttccggtcgagtactggaacaccagcgtgggcttggccaaggccgcg
ggcgcgaagaccccgttcatctcacgcctcacgtcgcgcgatgggaagaagttcgccgtc
gagaacgcggagaacgcggacgtggtgcgcgggcacctgaagtcggccgcgtacacgatc
tcgaagatcacgcgctcggagcgaaagcgaaaggcaccggcgccctacaccacgagcaag
ctgcagcaagacgcggtgaaccgcctcggcttcggcgccaagcgcaccatgcaggtcgcg
cagggcttgtacgaaggtgtggatctcggcaaggacggtggtccggtcggtctcatcacg
tacatgcgtaccgactccacgcgcctttcgccggaggccgtggcggcatgccgcgatcgc
atcgagcaggtttacggcaaggagtacctgcccgcgaacccgccggtcttcaagtcgaag
aagggtgcgcaggacgcacacgaagcgatccgcccgacgagcctcgagctgtcgcccgag
acggtgcgcaagcacctcaaggaagagcagttcaagctgtacaaattgatttgggaccgc
ttcgtggcgtgccagatgaaggaggccgtctacgatcagactggcgtcgacatcgaggcc
gcggtgagcggcggtccgacatacggcctgcgcgcgagcggtcgcgtgctcaagttcccc
gggtggcttgccgcggttggcgaaggcgggggcaagggcgagctcgcaggcgaagaagaa
gccgacgaagctgcaaaggctgcggcgctcaagccggatgccgaagcggcatcggacgac
gaagcttcgctgccagagctgtccgagggcgagaagctcaagatcgtcgacccgccgggc
gtgctcacggagcagaagttcacgcagccgccgccgcgctacaacgaaggctcgctcgtg
cgcgagctggaagatcgcggcatcggccgtccgagcacgtacgccgagatcatcagcaag
gtgcaggcgcgcgactacgtcgagaagctcgacgggcgcttccgccccacgacgctcggc
atgtacgtggtcgatggcctcgtgcgcagcgagctcgatttcatggacccggcgttcacc
tccagcatggaggcggagctcgacgaggtcgaggccggcaacgaagaccgcgtggtgctg
ctgtcgcgcttctacaagcgcttccgaaagcagctcgacgaggggaaaaagcaaaagcgc
tggaatcccgagccggagccgacgggcgagatctgcgacgtctgcaacgaaggcgagatg
atgaagcgctggtcgaagaacggatggttcctcggctgcgcgaactaccccaagtgcaag
aacacgcgcgacctcggccccgatggcaagggcacgcaggtgcgcgagacggacgtcatc
tgcgacaagtgcagcaagccgatggtgatccgcagcggtcgttacggcgagttcctgtcg
tgcacgggctacccgggttgcaagaacgcgaagccggtgccgctcggcgtgccgtgcccg
aagtgcggtggagacctcatcgaggttcgtcccaagaagaagggcggaaagacgttctac
ggctgctcgaattacaatcacgagacgctgaagtgcgatttcaagctctggcaaaagcca
attcaatccccttgcccggattgcggtgcagccttcttggtgatgggcggcacgaaggca
aaaccgatgatcgcctgcgccaacaaggagtgcggctacaagcggtcgccggatgcgccg
gagcctgaagtgacaacttcagtgaccactaacgcgaatggatcggtgtcgggtgaacct
cctgcagcaaatgccgaagaggaggtcgcctcgaaaacgaggccatcgggcgctgcaaat
aagctgtcgagcgcggatggtgttgcggtcgcgcgtgcagtgagccagagctaa
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