Pendulispora brunnea: LZC95_39395
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Entry
LZC95_39395 CDS
T10972
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pbru Pendulispora brunnea
Pathway
pbru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LZC95_39395 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbru03400
]
LZC95_39395 (uvrA)
DNA repair and recombination proteins [BR:
pbru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZC95_39395 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LZC95_39395 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
AAA_29
AAA_16
nSTAND1
SMC_N
RsgA_GTPase
BCA_ABC_TP_C
AAA_23
AAA_25
DnaJ_CXXCXGXG
AAA_28
HUTI_composite_bact
Viral_helicase1
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
WXA92503
LinkDB
All DBs
Position
10065838..10068762
Genome browser
AA seq
974 aa
AA seq
DB search
MDRLVVVGARQHNLKNVDLSLPRGKLVVFTGPSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLEQLAKPDVQRIDGLSPAIAIEQRPLAKSPRSTVGTVTEIADYLRLLFARVGVPHC
PNCGKRIEAQTVQQIVDHVLALTDGTRLSILAPIVRGRRGELKLELERLRREGFVRVRID
DSVVDLGDEIQLDGRKAHDLDVVVDRIVLKEGLKGRLTDSVELALKLGDGRLLVAVEGQE
PFWLSERFACVDCGISLPPIEPRIFSFNGPHGACPACDGLGARVVVDPERVIGDPKRTLR
EGVVLAWGRRGSVSLATEVARAVEALSVDPDVPWGKMREAQRKAILFGLGTEAEPPPDGA
KKKRGKKKNYEGIVPRLTALQMADGENGEDFNDDDPDASEGAIGEDELGRFLATRTCDAC
HGRRLRPEALAVKLGGKDISELGTMPLRHLGAFLDELKAENGAGEDLAARERAIAEPLIN
AVTARLGFLVDVGLDYLSLDRSAQTLSSGEGQRIRLATQIGAALVGVMYVLDEPSVGLHA
RDNARLIEAQARLRDLGNTVLVVEHDREAILAADHVVDMGPGAGVHGGRVISQGTPAEVM
ADPASLTGPYLSGERTLPIMRDRRVSGRGEVRVVGARAHNLRNVTAEIPIGLLTCITGVS
GSGKSSLIVDTLLPAARSKLYMATAPVGECDGVEGLEQIDKVISIDQAPLGRTPRSNPAT
YTGVFAQLRELYANLPDARARGYKPGRFSFNVKGGRCEACQGDGLLRVEMHFLPDIFVTC
DTCGGKRYNRETLEIHYRGLSIADSLELTVEQASQTFDAIPRVYERLEALRKVGLGYLTL
GQSATTLSGGEAQRVKLARELARKATGRTLYVLDEPTTGLHFSDIEVLLSALFDLRDQGN
TIVIIEHNLDVVACADWVVDLGPEGGEGGGKIVAVGTPEQVAKSGIAHTSHYLREVLDRA
SDTQPKSKRIKSAG
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtctcgtcgtcgtcggcgcgcgacaacacaatctgaagaacgtcgatttgtcg
cttccccgcggcaaattggtggtttttaccggcccgagtggctcgggtaagtcctcgctg
gcgttcgatacgatctacgcggaaggccagcggcgttacgtcgagtcgctgagcgcctat
gcgcgccagttcctcgagcagctcgccaaaccggacgtgcaacgcatcgacggcctgtcg
cccgccatcgcgatcgagcagcgcccgctggccaaatcgccgcggtcgaccgtcggtacg
gtcacggaaatcgcggattacctgaggctactttttgcccgagtgggcgtgcctcactgt
cccaattgcggaaagcgcatcgaggcgcagacggtccaacagatcgtcgatcatgttttg
gcgctgaccgatgggacgcggctctcgatcctcgcgcccatcgtgcgcgggcggcgcgga
gagctgaaactcgagctcgagcgcctgcgtcgcgaaggtttcgtgcgcgtccgcatcgac
gattcggtggtcgacctcggggacgagatccagctcgatgggcgcaaagcgcacgacttg
gacgtggtcgtcgaccgcatcgtcctcaaggaaggactcaaaggtcgtctaaccgacagc
gtggagcttgcactcaagttgggtgacggacgactgctcgtcgcggtggagggccaggag
ccgttctggctttcggagcgattcgcctgcgtcgattgcgggatttcgttgccgcccatc
gaaccgcggattttctccttcaacggcccccacggtgcctgtcccgcgtgcgatggattg
ggggcgcgcgtggtggtggatcccgagcgcgtgattggcgatccaaagcgcaccttgcgc
gagggcgtggtgctcgcgtggggccggcgcggatccgtgtcgttggccacggaggtggcg
cgggcggtcgaagcgctgagtgtcgatcccgacgtgccgtgggggaagatgcgcgaggcg
cagcggaaagcgattctgttcgggctgggcaccgaggcggagcccccgcccgatggcgcg
aaaaagaagcgcgggaagaagaagaattacgagggaatcgtgccgcggctcaccgcactg
cagatggcggacggcgagaacggcgaggacttcaacgacgacgatcccgatgccagcgag
ggcgcgattggggaagacgagctcgggcgattcctggccacgcgcacgtgcgacgcgtgc
catgggcgacggcttcgacccgaggcgctcgccgtgaagctcggtggaaaggacatctcg
gagcttggcacgatgcccttgcggcatctcggcgccttcttggatgaattgaaggccgag
aacggcgccggggaggacttggccgcacgcgagcgcgcgattgccgaaccgctcatcaat
gcggtgacggcgcgtctcgggtttctcgtcgacgtggggctcgactacctctcgctcgat
cgaagcgcgcagacgctctccagcggcgagggccagcgcattcgcctggccacgcagatt
ggcgcggcgctcgtcggcgtcatgtacgtcctcgacgagccgtccgtcggacttcacgcg
cgcgacaatgcgcgcctcatcgaggcgcaggcgcgtctgcgcgatctgggcaacaccgtg
ctcgtcgtcgagcacgatcgcgaggccatcctcgcggccgaccacgtcgtggacatgggc
cccggtgcgggcgtgcatggcggaagggtcatcagccaaggcacaccggccgaggtcatg
gccgatccggcgtcgctcaccgggccgtacctctcgggcgagcgcacgctccccatcatg
cgcgatcggcgcgtgtccggccgcggcgaggtgcgcgtcgtcggggcgcgcgcgcacaac
ctgcggaacgtcacggcggagatccccattggccttttgacgtgcatcaccggcgtctcg
ggcagtgggaagtccagcttgatcgtggacaccttgctgcccgccgcgcggagcaaactg
tatatggccaccgcgcccgtgggcgagtgcgacggcgtcgaggggctcgagcagatcgac
aaagtcatctccatcgaccaagccccgctcggccgcacgcctcggtccaacccggccacg
tacaccggcgtgttcgcgcaactgcgcgagctctacgcgaaccttcccgatgcgcgggcg
cgcgggtacaagccggggcgattctccttcaacgtcaaaggcggccgctgcgaagcgtgc
cagggcgacggccttttgcgcgtcgagatgcacttcctgccggacatcttcgtcacctgc
gacacgtgcggcggcaagcggtacaaccgggaaaccctggagattcactaccgcggactc
tccatcgcggactccctcgagctcaccgtcgagcaggcgagccagaccttcgacgccatc
ccgcgcgtctacgagcggctcgaggctctgcgcaaagtcggactcgggtacctcaccttg
gggcaatcggcaacgacgctctcgggcggtgaggcgcagcgcgtgaagctcgcgcgcgag
cttgcgcgcaaggccacggggcgcacgctctacgtgctcgacgagcccaccaccgggctt
cacttctcggacatcgaggtcctgctcagcgccctcttcgatctgcgcgaccagggcaac
accatcgtcatcatcgagcacaacctcgatgtcgtggcctgcgcggattgggtcgtggac
ctgggtcccgagggcggcgaaggcggcggcaagatcgtcgccgtgggcacgccagagcaa
gtcgccaagagcggcatcgcgcacacgagccactacctgcgcgaggtgctcgatcgggcc
agcgacacgcagcccaaatcgaagcgcatcaagtccgccgggtag
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