KEGG   Pendulispora brunnea: LZC95_39395
Entry
LZC95_39395       CDS       T10972                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
pbru  Pendulispora brunnea
Pathway
pbru03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pbru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LZC95_39395 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbru03400]
    LZC95_39395 (uvrA)
DNA repair and recombination proteins [BR:pbru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LZC95_39395 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LZC95_39395 (uvrA)
SSDB
Motif
Pfam: UvrA_inter ABC_tran UvrA_DNA-bind AAA_29 AAA_16 nSTAND1 SMC_N RsgA_GTPase BCA_ABC_TP_C AAA_23 AAA_25 DnaJ_CXXCXGXG AAA_28 HUTI_composite_bact Viral_helicase1 Zn_ribbon_3
Other DBs
NCBI-ProteinID: WXA92503
LinkDB
Position
10065838..10068762
AA seq 974 aa
MDRLVVVGARQHNLKNVDLSLPRGKLVVFTGPSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLEQLAKPDVQRIDGLSPAIAIEQRPLAKSPRSTVGTVTEIADYLRLLFARVGVPHC
PNCGKRIEAQTVQQIVDHVLALTDGTRLSILAPIVRGRRGELKLELERLRREGFVRVRID
DSVVDLGDEIQLDGRKAHDLDVVVDRIVLKEGLKGRLTDSVELALKLGDGRLLVAVEGQE
PFWLSERFACVDCGISLPPIEPRIFSFNGPHGACPACDGLGARVVVDPERVIGDPKRTLR
EGVVLAWGRRGSVSLATEVARAVEALSVDPDVPWGKMREAQRKAILFGLGTEAEPPPDGA
KKKRGKKKNYEGIVPRLTALQMADGENGEDFNDDDPDASEGAIGEDELGRFLATRTCDAC
HGRRLRPEALAVKLGGKDISELGTMPLRHLGAFLDELKAENGAGEDLAARERAIAEPLIN
AVTARLGFLVDVGLDYLSLDRSAQTLSSGEGQRIRLATQIGAALVGVMYVLDEPSVGLHA
RDNARLIEAQARLRDLGNTVLVVEHDREAILAADHVVDMGPGAGVHGGRVISQGTPAEVM
ADPASLTGPYLSGERTLPIMRDRRVSGRGEVRVVGARAHNLRNVTAEIPIGLLTCITGVS
GSGKSSLIVDTLLPAARSKLYMATAPVGECDGVEGLEQIDKVISIDQAPLGRTPRSNPAT
YTGVFAQLRELYANLPDARARGYKPGRFSFNVKGGRCEACQGDGLLRVEMHFLPDIFVTC
DTCGGKRYNRETLEIHYRGLSIADSLELTVEQASQTFDAIPRVYERLEALRKVGLGYLTL
GQSATTLSGGEAQRVKLARELARKATGRTLYVLDEPTTGLHFSDIEVLLSALFDLRDQGN
TIVIIEHNLDVVACADWVVDLGPEGGEGGGKIVAVGTPEQVAKSGIAHTSHYLREVLDRA
SDTQPKSKRIKSAG
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggatcgtctcgtcgtcgtcggcgcgcgacaacacaatctgaagaacgtcgatttgtcg
cttccccgcggcaaattggtggtttttaccggcccgagtggctcgggtaagtcctcgctg
gcgttcgatacgatctacgcggaaggccagcggcgttacgtcgagtcgctgagcgcctat
gcgcgccagttcctcgagcagctcgccaaaccggacgtgcaacgcatcgacggcctgtcg
cccgccatcgcgatcgagcagcgcccgctggccaaatcgccgcggtcgaccgtcggtacg
gtcacggaaatcgcggattacctgaggctactttttgcccgagtgggcgtgcctcactgt
cccaattgcggaaagcgcatcgaggcgcagacggtccaacagatcgtcgatcatgttttg
gcgctgaccgatgggacgcggctctcgatcctcgcgcccatcgtgcgcgggcggcgcgga
gagctgaaactcgagctcgagcgcctgcgtcgcgaaggtttcgtgcgcgtccgcatcgac
gattcggtggtcgacctcggggacgagatccagctcgatgggcgcaaagcgcacgacttg
gacgtggtcgtcgaccgcatcgtcctcaaggaaggactcaaaggtcgtctaaccgacagc
gtggagcttgcactcaagttgggtgacggacgactgctcgtcgcggtggagggccaggag
ccgttctggctttcggagcgattcgcctgcgtcgattgcgggatttcgttgccgcccatc
gaaccgcggattttctccttcaacggcccccacggtgcctgtcccgcgtgcgatggattg
ggggcgcgcgtggtggtggatcccgagcgcgtgattggcgatccaaagcgcaccttgcgc
gagggcgtggtgctcgcgtggggccggcgcggatccgtgtcgttggccacggaggtggcg
cgggcggtcgaagcgctgagtgtcgatcccgacgtgccgtgggggaagatgcgcgaggcg
cagcggaaagcgattctgttcgggctgggcaccgaggcggagcccccgcccgatggcgcg
aaaaagaagcgcgggaagaagaagaattacgagggaatcgtgccgcggctcaccgcactg
cagatggcggacggcgagaacggcgaggacttcaacgacgacgatcccgatgccagcgag
ggcgcgattggggaagacgagctcgggcgattcctggccacgcgcacgtgcgacgcgtgc
catgggcgacggcttcgacccgaggcgctcgccgtgaagctcggtggaaaggacatctcg
gagcttggcacgatgcccttgcggcatctcggcgccttcttggatgaattgaaggccgag
aacggcgccggggaggacttggccgcacgcgagcgcgcgattgccgaaccgctcatcaat
gcggtgacggcgcgtctcgggtttctcgtcgacgtggggctcgactacctctcgctcgat
cgaagcgcgcagacgctctccagcggcgagggccagcgcattcgcctggccacgcagatt
ggcgcggcgctcgtcggcgtcatgtacgtcctcgacgagccgtccgtcggacttcacgcg
cgcgacaatgcgcgcctcatcgaggcgcaggcgcgtctgcgcgatctgggcaacaccgtg
ctcgtcgtcgagcacgatcgcgaggccatcctcgcggccgaccacgtcgtggacatgggc
cccggtgcgggcgtgcatggcggaagggtcatcagccaaggcacaccggccgaggtcatg
gccgatccggcgtcgctcaccgggccgtacctctcgggcgagcgcacgctccccatcatg
cgcgatcggcgcgtgtccggccgcggcgaggtgcgcgtcgtcggggcgcgcgcgcacaac
ctgcggaacgtcacggcggagatccccattggccttttgacgtgcatcaccggcgtctcg
ggcagtgggaagtccagcttgatcgtggacaccttgctgcccgccgcgcggagcaaactg
tatatggccaccgcgcccgtgggcgagtgcgacggcgtcgaggggctcgagcagatcgac
aaagtcatctccatcgaccaagccccgctcggccgcacgcctcggtccaacccggccacg
tacaccggcgtgttcgcgcaactgcgcgagctctacgcgaaccttcccgatgcgcgggcg
cgcgggtacaagccggggcgattctccttcaacgtcaaaggcggccgctgcgaagcgtgc
cagggcgacggccttttgcgcgtcgagatgcacttcctgccggacatcttcgtcacctgc
gacacgtgcggcggcaagcggtacaaccgggaaaccctggagattcactaccgcggactc
tccatcgcggactccctcgagctcaccgtcgagcaggcgagccagaccttcgacgccatc
ccgcgcgtctacgagcggctcgaggctctgcgcaaagtcggactcgggtacctcaccttg
gggcaatcggcaacgacgctctcgggcggtgaggcgcagcgcgtgaagctcgcgcgcgag
cttgcgcgcaaggccacggggcgcacgctctacgtgctcgacgagcccaccaccgggctt
cacttctcggacatcgaggtcctgctcagcgccctcttcgatctgcgcgaccagggcaac
accatcgtcatcatcgagcacaacctcgatgtcgtggcctgcgcggattgggtcgtggac
ctgggtcccgagggcggcgaaggcggcggcaagatcgtcgccgtgggcacgccagagcaa
gtcgccaagagcggcatcgcgcacacgagccactacctgcgcgaggtgctcgatcgggcc
agcgacacgcagcccaaatcgaagcgcatcaagtccgccgggtag

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