Petaurus breviceps papuanus (sugar glider): 138144206
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Entry
138144206 CDS
T10505
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbrv03000
]
138144206 (RC3H1)
04121 Ubiquitin system [BR:
pbrv04121
]
138144206 (RC3H1)
Transcription factors [BR:
pbrv03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
138144206 (RC3H1)
Ubiquitin system [BR:
pbrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138144206 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-RING_2
zf-C3HC4_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
138144206
NCBI-ProteinID:
XP_068921642
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTNINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVCTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQDELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILSEE
GAVDLPSRKPTALPNGIVSSGNTVTQLIPRGTDSSYDSSLKPGKIDHLSSSAPGSPPDLL
EPGPKNISALPVTPHPVPPRGPAELPSMPVTKPLPMVPRGSQLYSAPQADAFYQDPRGAA
PPFEPAPYPPGMYYTPTPQCVSRFVRPPPSAPEPGPPYLDHYSPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPTPSYPREEIFQESPVPIEIPPAAVSPYVPESRERYQQIESYYP
VGPHPSQIRPPYIREPYNRLPPPPQAHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPT
LPHSFHPEELRPVSHFQYLDDDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAV
AAGSVEMTNVESKSVRDQRLELQRRVAETSDDDLIPFGDRPTVSRFGAISRTSKTMYQGS
GPMQALAAQGTSTKSISISDYSPYGAHGGWGGSPYSPHQTMPSQGHFTERERLSMSEVAS
HGKPLPSAEREQLRLELQQLNHQINQHTQLRGLEAVSNRLLLQRETNTLAGQPPPQPPPP
PPKWPGMVSSEQLSLELHQVEREIGKRTRELSMENQSSLDMKNKLGPSKQAENGQAEPQN
KVPTEDLALTFSSEVPNGSTLSQENISLLSNKTSSLTLAEDPEGGGDNNDSQRTGVTPSS
AP
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccgcaatggacggatttcctctcctgcccaatttgcactcagaca
ttcgacgaaacgatccgaaagcctatcagcctaggctgcggccacactgtctgcaagatg
tgcctgaacaagcttcaccgtaaggcgtgcccctttgaccagaccaatattaacactgac
atagagctcctgcctgtgaactcggccttgctgcagttagtgggtgctcaggtccctgag
cagcagcccattactttgtgtagtggggtagaagatacaaaacattatgaagaagcgaag
aaatgtgtagaggaattagcattgtatttgaaaccactcagcagtgcaagaggagtaggt
ctgaatagcaccactcagagtgttctgagccgcccaatgcagaggaaattggtgacatta
gtccactgccagctagtggaagaagaaggtcggattcgtgccatgagggcagctcgatct
ttaggtgaacggactgtcacagaactaatcctccagcaccagaatcctcagcaactttct
tcaaatctttgggcagcagtcagggccaggggctgccagttccttggaccagcaatgcag
gaggaagccctgaagctggtcctgctggccttagaagatggatctgctttgtctcggaaa
gtcttggttctatttgtggtgcaaagattggagccacgatttcctcaggcctcaaaaacc
agcattggacatgttgttcagctattgtacagagcctcctgtttcaaggtgacaaaacgt
gatgaggattcctctttaatgcaattgaaggaggagtttaggacatatgaagctcttcgt
cgggaacatgactcccagatagttcagattgccatggaggcaggcttgcgcattgcccca
gaccaatggtcttctcttctttatggagaccagtcacacaaatctcacatgcagtccatt
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaactaacaattgct
cttcagaggactggtgaccctgcaaacctgaaccgcctgcgaccccatctggaactgtta
gcaaatattgaccctagtccagatgcccctcctccaacctgggaacagctagaaaatggg
ttggtcgctgtgtgcacagtggtacatggactggttgattatattcagaatcacagcaaa
aaaggaacagaccagcagcagcctcctcagcacagcaagtataaaacttacatgtgccga
gacatgaaacagagaggagggtgcccccggggggccagctgcacgtttgcacactcacag
gatgaattggaaaaatttcgtaaaatgaacaaacgtctggttcccagaagacccctgagt
gcctctttaggccagctcaatgaggtgggcctaccttcagcagctatcctttcagaagaa
ggggcagtggacctacccagcagaaaacctactgccctgccgaatgggattgtgtcatca
gggaacacggtgacacagctgatcccccgagggacggactccagctatgattctagtctg
aagccagggaagattgaccaccttagcagcagtgctcctggatcccctcctgacctactg
gaacctggacccaagaacatttctgccttacctgtgactccccaccctgtgccccctagg
ggaccagcagagctgccttccatgccagttaccaaacctcttcccatggtaccacgaggt
tcccagttatactcagcaccccaagcagatgcattttatcaggatcctcgaggggctgct
ccaccttttgagccagcaccatatcccccagggatgtactatactccaaccccacaatgt
gtctctcgctttgttcgacctccaccatccgctcctgaacctggtcctccatacttggat
cattactcaccttacctccaggatcgtgtagtaaactcccagtatgggactcagccacaa
cagtacccacccatgtacccaccacattatgatggccgtcgtgtgtaccctactccgtct
tatccacgagaggagattttccaggaaagccccgtacccattgagattccacctgcagct
gtttcaccttatgtaccagagtccagagagagataccagcaaatagagagttattatcca
gtgggtccacatccaagtcagataagaccgccatatatcagagagccttacaacagacta
ccacctcccccccaggcccaccctagtctagatgagctacatcgacgacggaaggaaatc
atggcccaactagaagagagaaaagtcatctccccacctccttttgcaccttcaccaacc
ttgccccactcattccatccagaggaacttcgtcctgtttctcatttccagtatttggat
gatgacctgaaagtcgctgggaaatacaaagggaatgattacagccagtactccccttgg
tcatgtgacaccatcggctcctacattgggaccaaagatgcaaagcccaaagatgccgtt
gcagctggcagtgtggagatgacaaatgtggaaagtaaaagtgtaagagatcagcggcta
gaacttcagcgaagggttgcagaaaccagtgatgatgacctcatcccatttggtgaccgg
cccacagtgtcccggtttggcgccatatctcgaacttccaagaccatgtatcagggttct
ggcccaatgcaggctctggcagctcaggggacttccaccaaatcaatcagtatttctgat
tacagtccatatggagctcatggtggctggggaggttctccatattcccctcaccaaaca
atgccttctcagggacacttcactgaaagggaaagattgtccatgtcggaggtggccagt
catgggaagcccttgccctctgctgagagagaacagctcagactagagctgcagcagttg
aaccaccagattaaccagcacacccagcttcgaggactcgaggctgttagtaataggctg
ctgttgcagagggagacgaacactctggcaggccagccccctccccaacctccaccacca
ccccccaagtggcctggaatggtctcaagtgagcagttgagtttggagctacaccaggtg
gagcgggaaatcgggaagagaactcgggagctgagcatggagaatcaatcttctctggac
atgaaaaacaaattgggtccaagtaagcaagcagaaaatggacaagctgaaccacaaaac
aaggttccaactgaggaccttgcattgacattcagcagtgaggtgccgaatggatcgacc
ttatctcaagagaacatcagcctcctgtcaaacaagacctcctctctgaccctggctgag
gatcctgagggaggaggagataacaatgactctcagaggacgggagtcacacctagctct
gctccctaa
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integrated database retrieval system
