Petaurus breviceps papuanus (sugar glider): 138147802
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Entry
138147802 CDS
T10505
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv04120
Ubiquitin mediated proteolysis
pbrv04137
Mitophagy - animal
pbrv04141
Protein processing in endoplasmic reticulum
pbrv05012
Parkinson disease
pbrv05014
Amyotrophic lateral sclerosis
pbrv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138147802 (PRKN)
04120 Ubiquitin mediated proteolysis
138147802 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138147802 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
138147802 (PRKN)
05014 Amyotrophic lateral sclerosis
138147802 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
138147802 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbrv04131
]
138147802 (PRKN)
04121 Ubiquitin system [BR:
pbrv04121
]
138147802 (PRKN)
03029 Mitochondrial biogenesis [BR:
pbrv03029
]
138147802 (PRKN)
Enzymes [BR:
pbrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
138147802 (PRKN)
Membrane trafficking [BR:
pbrv04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
138147802 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
138147802 (PRKN)
Xenophagy
Other xenophagy associated proteins
138147802 (PRKN)
Ubiquitin system [BR:
pbrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
138147802 (PRKN)
Mitochondrial biogenesis [BR:
pbrv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
138147802 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
ubiquitin
IBR_1
IBR
Rad60-SLD
AsnRS_N
Dsc3_N
Rad60-SLD_2
Crinkler
Motif
Other DBs
NCBI-GeneID:
138147802
NCBI-ProteinID:
XP_068926494
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDADTNIFQLKEMVAKRQGVPADQLHVIFAGKELRNDLTLQNCD
LDQQSIVHIVRRAQRDDQKGEESGQNNPVHSRRVTVREPESLTRVDLSSSILPAYSVGLA
VILGNEDKDASHQAGNLGMPSYNSFYVFCKGDCQDVQPGKLRVRCSTCKQSTLTLDQGPS
CWDDVLISNRMSGICHSPDCNGTGAEFYFKCGAHPTSANETSVALSLITTNSRSISCITC
TDVRNPVLVFQCIHRHVICLDCFHLYCVTRLNDRQFIYDPVLGYSLPCVAGCPDSLIKEL
HHFRILGEEQYNRYQRYGAEECVLQMGGVLCPSPGCGAGLLLEPEVRKVTCEPSNGLGCG
FVFCRDCKEEYHEGECSTLFQALGATAQAFMVDEQAAERARWEEASKETIKKTTKPCPRC
HIPVEKNGGCMHMKCPQPQCKFEWCWNCSLEWNRTCMGDHWFDV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgttaggttcaactccagtcatggtttcccagtggaggtcgatgcagac
accaacatcttccagctcaaggagatggttgctaagagacagggggttccagctgaccag
ttgcatgtgatttttgcaggaaaggagcttaggaatgacttgacactgcagaactgtgac
ctggaccagcagagtatagttcatattgtacggcgagcccagagagatgatcaaaaaggg
gaggaatctgggcagaacaatcctgtacactctagaagagtcacagttagagaaccggag
agcttgaccagagtggacctcagtagcagcatcctccctgcttattccgtgggcctggcc
gttattttgggtaatgaggacaaggatgcatcacatcaagctggaaatttaggtatgccc
agttacaacagcttctatgttttctgcaaaggagactgtcaagatgttcagccaggaaaa
ctcagggtacggtgcagcacctgtaaacagtcaacgctgaccttggaccagggtccatca
tgctgggatgatgtcctgatttcaaacaggatgagtggtatttgtcattccccagattgc
aatggaactggagcagagttctactttaaatgtggcgcacacccaacctctgccaatgag
acatctgtggctctgagcctgattacaacaaacagtcgtagtatcagctgtatcacatgt
actgatgtcagaaatcctgtgttggtgttccagtgtatccatcgccatgtcatttgccta
gactgtttccatttatactgcgtgacaagattgaatgatcgacaattcatttatgatcca
gtacttgggtattcccttccttgtgtggctggctgtccagactccttgattaaagagctt
catcacttcagaattcttggggaagaacagtacaaccgatatcaacgctatggagctgag
gaatgtgtcctacaaatgggaggagtcctctgccccagtccagggtgtggagcaggcctc
ctccttgaaccagaagtgaggaaagtcacatgtgagccaagcaatggactgggctgtggg
tttgtcttctgccgtgattgtaaagaagaataccacgaaggggaatgcagcaccctcttt
caagccttaggagcaacagcccaggcctttatggtggatgaacaagctgctgagagagca
agatgggaggaggcctccaaagaaacaatcaagaaaacaaccaaaccttgtccccgttgc
catataccggtggaaaaaaatggaggatgcatgcacatgaagtgccctcaacctcaatgc
aagtttgaatggtgctggaactgtagcttagaatggaaccgaacctgcatgggagaccac
tggtttgacgtatag
DBGET
integrated database retrieval system
