Petaurus breviceps papuanus (sugar glider): 138148847
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Entry
138148847 CDS
T10505
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pbrv03037
]
138148847 (CCDC88A)
Cilium and associated proteins [BR:
pbrv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138148847 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
GAS
Motif
Other DBs
NCBI-GeneID:
138148847
NCBI-ProteinID:
XP_068927833
LinkDB
All DBs
Position
Unknown
AA seq
2062 aa
AA seq
DB search
MENEIFTPLLEQFMSSPLVTWVKTFGPLAAGSGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIQNLSILVRQIKSYYQETLQQLIMMSLPNVLTIGKNPFSEQGTEE
IKKLLLLLLGCAVQCQKKEEFIERIQSLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
ISQEDLEPLLKNMALHLKRLIDERDEHTETIIELSEERDGIHFLPHASSAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQEVEQMETELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKS
MLEDQLEGTRTRSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMSLEMAQKQ
SMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELASSRLLKLEMENQSLVKTIEELRN
AVDSVESSNSKILKIEKENQRLSKKLEGLENEIIQEKQSLQNCQNLSKDLMKEKAQLEKT
LETLRENSERQIKILEQENEHLNQTVASLRQRSQISAEARVKDIEKENKILHESIKETSS
KLNKIEFEKRQIKKELEHYKERGERAEELENELQHLEKENESLQKKITNLKITCEKIETL
ELENSELEVEKRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRTVESLKCASMKMA
QLQLENKELESEKEQLKKSLELMKASCKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQELETENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDMTLEENNIKIGNLEKENKSLFKEIGVYKESCIRLKELEKENKELVKRATIDK
KTLITLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLSDEQSTDDSRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNFNQQLRQELKTVKKNYEALKQRQEEERMLQNSP
PRSGDDTKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQA
QILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQNTSLMNQNAQLLIQQSALENENEC
IVKEREELKSLYDALVKDHEKLENLHERQASEYESLIAKHGTLKSIHKNLEVEHKDLEDR
YNQLLKQKGQLEELEKMLKVEQEKMMQENKKHETVAAEYKILRGENDRLSHTYNQLLRET
EILQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLE
EENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQY
KFYDPSPPRRRGNWITLKMRKLIKSKKDVNRERMKSLTLTPTRSESSEGFLQLPHQDSQD
SSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMVL
AGGQWTGSSENLEVPDDISTGKRRKELGAMAFSTTAINFAAVNSSTGFRSKQLVNNKDTT
SFEDVSPQGISDDSSTGSRVHGVLDINCADAHTPPVRGIATMCRVPCQICSSRPASLDSG
RTSTSNSNNNASLHDVKAGAVNSQSRPQSHSSGEFSLLQEHEAWSSSSSSPIQYLKRYTR
SSPVLQHKIPETLDSRAHHKMKTGSPGSEVVTLQQFLEESNKLTSIQMKSSSQENLLDEV
MKSLSVSPDFMGREKAVSCGLVRSISGKTTADFSDGRSTKAEQFVRPSPQKTEDSYFISS
PGKSTSSSQGKVKLVKETFISQRQSKDSNPYATLPRASSVISTAEGTTRRTSIHDFLSKD
SRQPVSIDPSPATADNIPSTSSEYYVHQQPPDLVHSSTNTIDSHSQSDLITAMHSTYIVS
TSTQTRNSRIERSNFHDKNFATINVCSNTVGISASESIGPFSITHIAQPFLSLNTELVSN
ISGLPQRPAIQTNDHTFISSLKAVQKDNEQPSENQKSVNSNPQSSLNSSEITTLSCLNPG
ETEPPLLFSEDNQTVWYEYGCV
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgagatttttactccactcctggaacagttcatgtccagtcccttggtcact
tgggttaaaacatttggacctctggctgcaggaagtgggaccaatctggatgaatatgta
gccctggtggatggtgtgttcttgaatcaggtcatgctacaaattaatccaaaatcagag
agtcagcgagtaaataaaaaagtcaacaatgatgcctcacttagaattcaaaatttatcc
attttggtgagacaaatcaaatcttattaccaggagactttgcagcagttgatcatgatg
tctttgccaaatgtcttaaccattggcaaaaatcccttttctgaacaaggtacagaagaa
attaaaaagctactgttacttttacttggttgtgctgttcagtgtcagaagaaagaagaa
ttcattgaacgaatccaaagtttagattttgacacaaaagcagcagttgccgcgcacatt
caagaggtaactcataatcaggaaaacgtattcgatctccagtggatggaagtgactgat
atttctcaggaggatcttgagccactcttgaaaaatatggcattacatttgaaaagactt
atagatgagagagatgaacacacagagaccattatagagctctctgaggagcgagatggt
attcattttctacctcacgcctcatcagcacagtcaccttgtggttctccaggcatgaaa
cggactgaaagtagacaacatttatcagttgaactggcagatgctaaggcaaagataaga
aggcttaggcaggaattggaggaaaagacggaacaattgttagactgtaaacaggaggtt
gaacagatggagacagaattaaagaggcttcaacaagagaacatgaacttgctttcggat
gctcgctcagccagagtttatcgagatgaattggatgcacttcgagaaaaagcaatcaga
gttgacaaacttgaaagtgaagtcagtagatataaagagaggctacatgatattgaattt
tataaagcaagagttgaggaattaaaagaagacaatcaagtgttattggaaacaaaaagt
atgttagaagaccaactggaaggaacccgtactcgttctgataaattacatgaattagaa
aaagaaaacttacaactgaaggccaaattacatgatatggagatggaacgtgatatggat
agaaaaaagattgaagaactaatggaagaaaatatgagtttggaaatggcccagaaacaa
agtatggatgagtcattacatcttggctgggaattggaacagatatcaagaactagtgaa
ctctcagaagcaccacaaaaatctctcggccatgaggtgaatgaattagcatcaagtagg
ttattgaagttggaaatggaaaatcagagtttggtgaagacaatagaagagcttcgaaat
gctgtggattctgtagaaagcagtaattccaaaatactgaaaattgaaaaagaaaaccaa
agacttagtaagaagctggaaggtcttgaaaatgaaattattcaagaaaagcaaagtctt
caaaattgtcaaaatctgagcaaggatctaatgaaggagaaagcgcagctggaaaagacc
cttgaaacacttcgagaaaattcagaaagacagattaaaatattagaacaagaaaatgag
catttgaatcaaactgtagcatccctaaggcagcgatcacaaataagtgctgaagcaagg
gtgaaagatattgagaaagaaaataaaatcctgcatgaatctattaaagaaacaagcagc
aaattaaacaagattgaatttgaaaagagacaaattaaaaaagaattggaacattacaaa
gaaagaggagaacgagcagaagaacttgagaatgagttgcaacatcttgaaaaggaaaat
gaatcattacaaaaaaagataactaatttaaaaattacctgtgagaaaattgagacctta
gagctagaaaattctgaactggaagtggaaaagagaaagttgaaaaagacattagatagc
tttaaaaaccttacttttcaactagaatccttggagaaagaaaattctcaactagatgaa
gaaaacttagaattaaggaggacagtggagtctttgaaatgtgcaagcatgaaaatggct
caactacagttggaaaataaagaactggaaagtgaaaaagaacaacttaagaagagttta
gagctcatgaaagcttcttgcaagaagacagaacgtttagaagttagctaccagggatta
gatactgaaaaccaaagactgcagaaagctctagagaatagtaataaaaaaattcagcaa
ttagaaagtgaactacaagaattagaaacagaaaatcagacattgcaaaaaaatcttgaa
gagttaaaaatatctagtaaacggttagagcaattagaaaaggaaaacaagttactagag
caagagacttctcaactagaaaaagataagaaacaactggaaaaagagaataagagactc
cgacaacaggcagaaattaaagatatgacattggaagaaaataatattaaaattggaaat
cttgaaaaggaaaacaaaagtcttttcaaagaaataggtgtatataaagaatcctgtatt
cgtctcaaagagctagagaaagaaaacaaggaacttgtgaaaagagcaactattgacaaa
aaaactcttattactttacgtgaggatttggtgagtgaaaaattgaagactcagcaaatg
aataatgatttagaaaaacttactcatgaactagaaaagataggattaaataaagaacgt
ctcttgagtgatgagcaaagtactgatgacagcaggtacaagcttttggagtcaaaatta
gagtccacactaaagaaatctctggaaataaaggaagaaaaaattgctgctttggaagct
cgattagaagaatcaactaattttaaccagcaattgcgtcaagaacttaaaacagtgaaa
aaaaattatgaagctcttaaacaaaggcaagaggaagaaagaatgctgcagaattctcct
ccaagatctggtgatgatactaaatgggaaagagaaagtcaagagacaactagagagctt
ttgaaggttaaagacaggttaattgaggtggagaggaataatgccaccctgcaagcagag
aaacaagcattgaaaactcaattgaagcaacttgagacacagaacaataatctacaggcc
cagattcttgcacttcagcggcagactgtttctttacaagaacaaaatactacccttcag
actcagaatgctaagcttcaggtggaaaactctacccttaattcccaaaatacctcactt
atgaaccagaatgcccagttattaattcagcagtctgccttggaaaatgaaaatgaatgt
atagtcaaagaaagagaagaactgaaatctctctatgatgcactggtcaaagaccatgaa
aaattggaaaatcttcatgaacgtcaggcttctgaatatgagtccctcattgccaaacat
ggaacactaaagtctatacacaaaaatcttgaggtggaacataaagacctcgaagatcgc
tataaccagttactgaaacagaaaggacagttggaagaattggaaaaaatgctcaaagtt
gagcaagagaaaatgatgcaagaaaataagaaacatgaaactgtagctgcagaatacaag
atacttcgaggtgaaaatgataggttgagtcacacatataatcaactgctgagagagact
gaaattttacaaactgaccacaagaatttaaagagcctattaaacaattccaaattggaa
cagacaagattagaagctgaattttcaaagctaaaggaacagtatcaacagctggatatt
acatccactaaactgaataaccaatgtgagttacttagccagcttaaaggaaacttagaa
gaagaaaacagacatctactagatcaaattcagacattaatgctccagaatagaacacta
ttggaacaaaatatggaaagcaaggatctttttcatgttgaacaaagacagtacattgat
aaattaaatgaattaagaagacaaaaagaaaaattagaagaaaagattatggatcagtac
aaattttatgacccatcacctcccagaaggagaggcaactggattactttaaaaatgagg
aaacttataaagtctaagaaagatgttaatcgggaacgtatgaagtccctaacattaaca
cccacacgttcagaatccagtgaaggatttcttcagctaccccatcaagacagtcaagat
agttcctcagtgggttcaaattctctagaagacgggcaaaccttggggaccaagaaaagc
agcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagacaaa
atgaaggcctgctaccgtcgctccatgtccatgaatgacctggtgcaatccatggtccta
gcaggaggacagtggacaggtagttctgagaatttggaggttcctgatgatatttctacg
ggtaaaaggagaaaagaattgggagctatggccttctctactacagctatcaactttgca
gctgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatactaca
tcatttgaagatgtaagtccacaaggtattagtgatgattctagtacgggatcaagagtt
catggagtactggacattaactgtgcagacgctcatactcctcctgttcgtggcatcgct
acaatgtgcagggttccttgtcagatctgttcttccaggccagccagccttgatagtggt
agaacatccactagtaatagcaataataatgcttcactccatgatgtcaaagcaggtgca
gttaatagtcaaagcagaccacaaagccacagcagtggagaatttagcctacttcaagaa
catgaggcatggtccagtagtagcagcagtccaatccagtacttgaaacgatataccaga
tcaagtcctgtgctccagcataaaattcctgaaacactagatagccgagcacatcacaag
atgaaaactggttcccctgggagtgaagtggttactctacagcagtttttagaagaaagc
aacaagcttacctcaatacagatgaagtcttcaagccaagaaaaccttttagatgaagta
atgaaaagtttatctgtctctcctgactttatgggaagagaaaaggcagttagctgtggt
cttgttaggtcaataagtggaaaaaccacagctgacttctctgatggacggtcaactaag
gctgaacagtttgtcaggcctagtcctcaaaagactgaagattcttacttcattagttct
ccaggaaaatctacatcaagctctcaaggaaaggtcaagttagtaaaagaaacctttata
tcacaacgacaatcaaaagatagtaacccttatgctactttacctcgtgcaagcagtgtg
atctctacagctgaggggactacacgaaggacaagcattcatgactttttgtccaaggac
agtagacagcctgtgtcaattgatccatcaccagctacagctgataacatcccatcaaca
tctagtgagtactatgtacaccaacagccccctgatttagttcacagttccacaaatacc
atagattcccattcacaaagtgatttaattacagctatgcattcaacctatattgtgtct
acctctactcagactaggaattcaagaattgaaaggtcaaattttcatgacaaaaacttt
gcaaccattaatgtatgtagtaatacggtgggaatatcagctagtgaaagtataggaccc
ttttctattactcatatagcccagccatttttatccctgaatacagaattagttagtaac
ataagtgggttgccccaaagaccagccatccaaactaatgatcacacatttatctcatca
cttaaagctgtacagaaagataatgaacagccttctgagaaccagaagtctgttaatagt
aacccacagtcttctctaaatagcagtgaaattactactctttcatgtctaaatcctggt
gagacagaacccccattattattctctgaagataatcaaactgtttggtatgaatatggt
tgtgtatga
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integrated database retrieval system
