Petaurus breviceps papuanus (sugar glider): 138149135
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Entry
138149135 CDS
T10505
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138149135 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbrv04121
]
138149135 (TRIM54)
Ubiquitin system [BR:
pbrv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138149135 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
DUF349
CoiA_N
UvrD_C
GH123_cat
SpoIISA_toxin
DD_DDX21-DDX50
Zn_ribbon_FGT1_2
DUF1421
FlgN
PHP
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
138149135
NCBI-ProteinID:
XP_068928165
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPNIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLGQRFETLCAVLEERKAELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIKKVGDMAKVELAG
RPEPGYESMEQFSVNVEHVAEMLRTIDFQTGGSGEEEEEELVLEGEDGSAGAEEERLEAS
EGLLVGNAVQALNRREAQQLLV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtgggtttcaagccgctgctgggggatgcacacagcatggataacctg
gagaagcaattgatctgcccgatctgtctggagatgttctccaagccggtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgccaacgacgtcttccaggcttcaaatcct
ctgtggcaatcccggggttccaccacggtatcctcagggggacggttccgctgcccatcc
tgtaggcatgaggttgttctggacagacatggtgtctatggactacagcgcaacctgctg
gtggaaaacatcattgacatttacaagcaggagtcttcacgccctctgcattctaaggca
gagcagcacttaatgtgtgaggagcatgaggaagagaaaattaacatctattgcctgagc
tgtgaggtgcctacctgctccctctgcaaggtatttggtgctcacaaagactgtgaggtg
gcaccactacccaacatctacaagcgccagaagagtgaactgagcgacggtattgcaatg
ctggtggctggaaatgaccgggtccaggcagtcattactcagatggaagaggtgtgccag
accattgaagacaacagtcgcaggcagaaacaactactgggacagaggtttgagacattg
tgtgcagtgctagaagagaggaaagcagagctgcttcaggccctggcccgggagcaggag
gagaagcttcagcgggttcgagggctcattcgtcaatatggagaccacttagaggcctca
tctaagcttgtggagtctgccattcagtccatggaggagccacagatggctctgtacctc
cagcaggccaaggagctgattaaaaaggttggggacatggcaaaggtggagttggctggg
cgtccagaaccaggctatgaaagcatggaacagttctcagtgaatgtggaacatgtggct
gagatgctccggaccattgacttccagactgggggttctggggaggaagaagaagaggag
ttggtgctggaaggggaggatggcagtgccggggctgaagaagagagactggaggcttca
gaggggctccttgtaggaaatgctgttcaagcactgaaccggagggaggctcagcagctt
ctggtctaa
DBGET
integrated database retrieval system
