Petaurus breviceps papuanus (sugar glider): 138150790
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Entry
138150790 CDS
T10505
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03013
Nucleocytoplasmic transport
pbrv03015
mRNA surveillance pathway
pbrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138150790 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
138150790 (CASC3)
03015 mRNA surveillance pathway
138150790 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrv03019
]
138150790 (CASC3)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138150790 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
138150790
NCBI-ProteinID:
XP_068930333
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MLGFVVSSALPLRRASVSQRPLRTGAADRLTGWRAXGGESSNSRSSEGARKPGRGSVLRK
MADRRRQRASQDTEDEESGASGSDSAGSRGGGGGGGGAGGGSSSSLRGGRSGGLNSRRME
GGGLRSPDESECESEDCIEGDAVLSDYESAEDSEGEEEYSEEESSKVELKSEANDAANSL
AKEEKGEEKPDPKGTVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKG
LFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRS
AHNPDDIKPRRIRKPRFGSSPQREPNWGNDRPNKPPRHQGSGGASLPPRTFVNRNAAGTG
RMPTSRNFSRAGGYKEGRTGFRSSENGGPHSIRSNDSVKHENGYRSRRLEYTPARDPSPD
MESSHGFGSPEKEEADSEPPPPAPETVPPPPDRPIEKKSYSRARRSRNKAGDASKLAEEV
PPPAEGPAPAPPPPPATPPPPPPPPPPPPPPSKTGNWEAPVDSSTGGLEQDMTQLNLTEQ
NWSPGQPQFLQPRELRGIPNHMHLGAGPPPQFNRMEEMSVQGGRAKRYSSQRQRPVPEPP
APPVHISIMEGHYYDPLQFQGPIYTHSDSPTPMPPQGMIVQPEMHLPHPGLHPHQTPAPL
PNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGSPSYPYAPGALPPPPPPHLYPNT
QAQSQVYGGVTYYNPVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRGSS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttttgtagtctcgtccgctctccctctccgccgagcttcggtctcccagcgg
cccttgcgaacgggtgcggcagacaggctgacgggctggcgggcgngcgggggggaatcg
agtaactcgcgatctagcgagggagcgcggaaacccggacgggggtcggttctccgcaag
atggcggaccgacggcggcagcgcgcctcgcaggacacggaggacgaggagtccggagcc
tcgggttcggacagcgccggttcccggggcggcggcggcggcggcggcggggccggcggc
ggctcctcttcctcgctgcgcggcggccgatccgggggcctcaattcccgacggatggag
ggaggcggcctccggagtcctgacgagtcggaatgtgaaagtgaagactgcatagaaggc
gatgctgttctctccgattatgaaagtgcagaggattcagaaggagaggaagaatacagt
gaagaggaaagttccaaggtggagcttaagtccgaagctaatgatgctgctaattctttg
gcaaaagaagagaaaggagaagaaaaacctgacccaaaaggcactgtgactggtgaaaga
caaagtggagatgggcaagagagcacagaacctgtagaaaacaaggtgggtaaaaaggtc
ccaaagcatttggatgatgatgaagatcggaagaaccctgcctatatcccccggaaagga
ctcttcttcgagcatgacctccgaggccaaactcaagaagaagaagtcagacccaaagga
cgtcagcggaagctgtggaaagatgagggtcggtgggaacatgacaagttcagagaggat
gaacaagcacccaagtctcggcaggagctcatagccctttatggttacgatattcgatca
gctcacaaccctgatgatatcaaacctcggagaatccgtaaacccaggtttggaagctct
ccacagagggagccaaactggggcaacgatcggccaaacaagcctccccgtcaccagggc
tctgggggagcctccttgccaccaagaacattcgtcaatcgtaatgctgctggtacaggg
aggatgcctacatctaggaacttctccagagctgggggctacaaggaaggaaggactggg
tttaggtcttcagaaaatggtgggccacatagcattcgttctaatgactctgtcaagcat
gaaaatggttatcgttctcggcgcctggaatacaccccagctagggacccatcccctgac
atggagtcttcccatgggtttggcagccctgaaaaagaggaagcagattcagagcctcct
ccccctgcccctgaaactgtaccaccccccccagacagacccattgagaagaagtcctac
tctcgagcaagaagatccagaaacaaagctggagatgcaagcaagttggcagaggaagtt
ccacctcctgcagagggaccagcccctgcacctccacctcccccagctaccccaccacca
ccaccaccaccaccaccaccaccaccaccaccctcaaagactgggaattgggaggcccca
gtggattccagcacaggaggacttgagcaagacatgacccaactaaatctgactgaacaa
aattggagcccagggcagcctcagttcctacaaccaagggagcttcgaggtattcccaac
cacatgcacctgggagcaggccctccacctcagtttaaccgtatggaagaaatgagtgtt
cagggtggtcgagccaaacgatattcttcccagcgtcagagacctgtccctgaaccacca
gccccccctgtgcacatcagtatcatggaagggcactactatgacccattgcagttccag
ggaccaatctacacccacagtgacagccctacgccaatgcctcctcagggcatgattgta
caaccagaaatgcacctccctcaccccggtttacatccccatcagacgccagcacctctg
cctaacccgggtctgtaccccccgccagtgtccatgtccccaggacagccaccgccccag
cagctgcttgcccctacctacttctctgctccaggtgtcatgaacttcggcagtcccagc
tatccctatgccccaggggcactgccccctcccccacctcctcacctgtaccctaatacc
caggctcagtctcaggtgtatggaggagtaacctattataacccagtccagcaacaggtg
cagccgaaaccttctccacccagacggacatcccagccagtcaccatcaaacccccacca
cctgaggttgtaagcagaggttccagttaa
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