Petaurus breviceps papuanus (sugar glider): 138152955
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Entry
138152955 CDS
T10505
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138152955 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrv03041
]
138152955 (CDC40)
Spliceosome [BR:
pbrv03041
]
Complex C
Other components
Step II factors
138152955 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
138152955
NCBI-ProteinID:
XP_068933152
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDNETGRCSLPAADSLIHLTKTPSANPSLVGTVDAAPEV
AVKEDVETGVHLDPAIKEVQYNPSYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPTHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQRKTEKRKK
FKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKKGKHEDDKPGEEKTI
LHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFVGHSKAVRDICFNGVGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgccatcgctgctttggcagcttcctacggctcaggctcggggtccgagtcc
gactccgacaatgagaccggccgctgttccttgcccgcagccgactcccttatccatctg
acgaagacgccctcggccaatccctctctggtagggaccgtggacgcggcgccggaggtg
gcggttaaggaagatgtggaaactggagtacaccttgatcctgccattaaggaagtccaa
tacaatccttcctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
actcaacagatggctgcccctaggaatatgctttctggatatgctgaaccaactcatatc
aatgatttcatgtttgaacaacagaggcgaacttttgcaacctatggctatgcattagac
ccctcattagataatcatcaagtttctactaaatatattgggtctgtagaagaagctgag
aaaaatcaaggtttaacagtgtttgaaactggacagaggaaaacagaaaagagaaaaaag
tttaaagaaaatgatgcatcaaatattgatggtttcttaggaccttgggcaaaatacgta
gatgaaaaagaagtagctaaaccttcagaagaagaacagaaagaattagatgaaattaca
gccaagaggcaaaagaaaggcaaacatgaggatgacaaacctggggaagaaaagaccatt
ttacatgtcaaagaaatgtatgactatcaaggcaggtcttatcttcatgttcctcaagat
gtcggtgttaatctccgttctacagtaccacctgagaaatgttatcttcccaaaaaacag
atccatgtttggtctggacatacaaagggtgtcagtgccgtcagactgtttcctctttct
ggccatttgttgctttcttgttccatggactgcaaaattaagttatgggaagtttatgga
gatcggcgctgtttgaggacatttgttggtcacagtaaagctgttagagatatctgcttt
aatggtgtaggaactcagttcctcagtgcagcatatgacaggtatcttaagctctgggac
actgagacaggtcagtgtatatcaagatttacaaaccggaaagttccttattgtgtcaag
tttaatcctgatgaagataaacagaatctttttgtggctggtatgtcagataagaagatt
gtgcaatgggacatcagaagtggggagatcgtgcaagaatatgataggcatttgggagct
gtcaacaccattgtgtttgtagatgagaataggcggtttgtgagcacttcagatgacaag
agcctacgtgtttgggaatgggacattcctgtagatttcaaatacatagcagaacctagt
atgcattcaatgcctgcagtgactttgtctcctaatgggaaatggctggcatgtcagtcc
atggacaatcagattttaatttttggagcacagaatcgattcagattgaataagaaaaaa
atatttaaagggcacatggtggcaggatatgcttgtcaggtggacttttccccagatatg
agctatgtgatatcaggagatggaaatggaaaattaaacatttgggactggaagactaca
aaactctacagtcgatttaaagctcatgataaagtatgcataggtgccgtgtggcaccca
catgaaacatctaaggttataacttgtggctgggatggtcttattaaattatgggattaa
DBGET
integrated database retrieval system
