Petaurus breviceps papuanus (sugar glider): 138155907
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Entry
138155907 CDS
T10505
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03015
mRNA surveillance pathway
pbrv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138155907 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138155907 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrv03019
]
138155907 (CPSF6)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
138155907 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
138155907
NCBI-ProteinID:
XP_068937272
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MGPPSPPSARSAAAAADRAAVGGRGGGGSGSRGKMADGVDHIDIYADVGEEFNQEAEYGG
HDQIDLYDDVISPSANNGDAPEDRDYMDALPPSVGDDVGKGSAPNVVYTYTGKRIALYIG
NLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPK
RELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGR
FPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVKGTRPLFLETRIPWHMGHSIEEIPIFG
LKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPL
GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG
APPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDAARTPL
SEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVL
ISSLQDCLHGIESKSYGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRER
ERHRDRDRDRDRERDREREYRHR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccccctcccccccctccgctagatctgctgctgctgctgcggaccgagctgct
gtaggtggccgcggcggcggcggcagcggcagccgagggaaaatggcggacggtgtggat
cacatagacatttacgcggatgtgggcgaggagttcaaccaggaagctgaatatggtggg
catgatcagatagatttgtatgatgatgtcatctctccatctgcaaataatggagatgcc
ccagaggatcgcgattacatggatgctctcccaccatctgttggcgatgatgtaggtaaa
ggatcagcaccaaatgttgtctatacatatactggaaagagaattgcattgtacattgga
aatcttacatggtggacaactgatgaagatttaactgaagcagtccattctttgggagta
aatgatattttggagataaagttttttgaaaaccgtgctaatggccagtcaaagggtttt
gcccttgttggtgttggatctgaagcatcctcaaaaaagttaatggatctgttgcctaaa
agagaactacatggtcagaatcctgttgtgactccttgtaataagcagttcctgagtcaa
tttgaaatgcagtccaggaaaactacacaatcaggacaaatgtctggggaaggtaaagct
ggccctccaggaggcagttcacgtgcagcatttccacaaggtggtagaggacggggccgt
tttccaggggctgttccaggtggggacagatttcctggaccagccggaccaggagggcca
cccccacctttcccaggaaatttgatcaagcatcttgttaaaggaactcggcctttgttc
ctggaaactaggattccatggcatatggggcacagcatagaggaaatacccatttttggc
ctaaaagctggacaaactccaccacgtccacccttaggtcctccaggccctcccggccca
ccaggccctccacctcctggtcaggttcttcctcctccattagctgggcctcctaatcga
ggtgatcgccctccaccaccagttctttttccaggacagccttttgggcagcctccactg
ggcccacttcctcctggccctccacctccagtgccaggctacggcccccctcctggccct
ccacctccacagcagggcccacctccgcctccaggcccttttccacctcgcccacctggc
cctctggggccacccctcacacttgctcctcctcctcatcttcctggaccacctccaggt
gcccccccaccagctccacacgtgaacccagctttctttcccccaccaaccaacagcggc
atgccaacatcagacagccggggtccaccacccaccgacccatatggccgacctcccccg
tatgatagaggtgactatgggcctcctggaagagaaatggatgctgcaagaacgccattg
agtgaagcagagtttgaagaaatcatgaatagaaacagggcgatttcaagcagcgccatt
tcaagagctgtgtctgacgccagtgctggtgattatgggagtgctattgagacactggta
actgctatttccttaattaaacagtccaaagtatctgctgatgatcgttgcaaagtgctt
attagttccttgcaggattgccttcatggaattgagtccaaatcttatggttctggatca
agaagacgtgaacgatcaagagagagggaccacagtagatccagagaaaagagcagacgt
cacaaatcccgtagtagagatcgtcatgatgattattacagagagagaagccgagaacga
gaaagacatcgggaccgtgaccgagaccgtgatagagagcgtgacagagagcgagagtat
cgccaccgctag
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