Petaurus breviceps papuanus (sugar glider): 138158506
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Entry
138158506 CDS
T10505
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbrv04040
]
138158506 (SCN11A)
Ion channels [BR:
pbrv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138158506 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
138158506
NCBI-ProteinID:
XP_068940674
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MKTEDKMACPVIFPDARNFHLFTPDSLAMIEKLIAAEKLKKKTQDPSGFEVSPRPQLDLK
VSRKLPKIYGDIPPEVVGKPLEDLDPFYVSHKTFMVLNKKRTIYRFSAKPALFILGPFNP
IRRLAIGISVHSLFSMFIICTVIVNCVFMATPNDYNKDAEYVFTAIYIFEALIKIIARGL
FLDEFTYLRDPWNWLDFVVIMLAFLSYMREELESVSALRTFRVLRALKAISVISGLKVIV
GALLRSVKKLVDVMILTIFCLSIFALVAQQFFMGSLRYRCIKKTCLRISMPFLYTENCTE
NKSEGSSEKRLCGFWMGNSSCCPGFFCCKTKMSPDYNFTNFDNFGWAFLSMFRVMTQDSW
ERLYQQTLRAAGPLAVVFFVVVIFLGSFYLINLTLAVVTMSYEEQNRNVAAETEAKEKMF
REAVELLKQEQETLVAMGIDRSSLSSLETSSISCQKKSLFSNKRRKSFLVGNSGRDQAPL
SDPDEGIQTKQQLLNQTKRLSQNLSVDYWDDHGDTFQRQRALSAVSIVTITMQEYEKSQQ
KYLPCQSNFVSKYCIWECCPLWLRIKRIVELIITDPFADLVITICIIVNTVFMAMEHHKM
DDNFKKMLNTGNYVFTGIFVTEMFFKIIALDPYYYFLRPWNIFDSIIVVLSLMEIILTVG
VSNLSLLRSLRLLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTLVLAIIVFIFSVVGMQL
FGPFFKSEKIRERRWHMGDFFHSFLVVFRILCGEWIDNMWECMRESRHHHVLCILVFLLI
LVIGNLVVLNLFIALLLSSFSREEREGNGAGEVRKTKLQLAFDRFRRAFHFVKRAIWQFC
SSSFRKQRFRKSKDMSKKHKAQNKDVIPLESRISREQANHEKLCSQEETSPPGLTGLGCI
QENVNTRHSSLIKAPLAEEEEDGDNDCLDDPQDFMEAEFHEQKFDEISYVSNCSTIDLRD
PKLWVPEMVPEKGPERCFPKGKDKCFPCFALNVRKSSGILWRNLRVTCYRIVKHNWFESF
IIFMILLSSGALIFEDCYISSRPTIKELLKFTDKVFTYIFIFEMFLKWVAYGFRKYFTNA
WCVLDFIIVIVSIISLISEFLKPKLSSNVKSLRTLRALRPLRALSQFEGMRVVVNALVGA
IPAILNVLLVCLIFWLIFCMLGVNLFSGRFGKCIDQTKKEAINYTIINNKSMCTNERYPG
ACWTNAKVNFDNVGIGYLALLQVATFKGWMEIMYAAVDSRGEDEQPAFEYNMIAYLYFVV
FIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPVPR
PLNTCQAFVFDVVTSQAFDIFIIILICLNMIIMMAETDSPEGDNTQKAQLLETLNSVFVL
IFTVECLLKIFALRQYYFANGWNLFDCVVVVLSIISFLVSLLESRTTIPFPPVLFRVIRL
ARIGRILRLVRAAKGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIIGMTNFSNVRYEAG
IDDMFNFRTFGSSMLCLFQITTSAGWDALLSPMLSSRFSSCGSENSCSSENSDCVSSVMA
ITFFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLSEDDFDIFYETWEKFDPEATQF
IEYSALSDFADALPDPLRVAKPNRNQLLVMDLPMVSGNRLHCMDILFAFTTRVLGNSEGI
DCLKSQMEEKFMEANPYKKLYEPIVTTTKRMEEERCAAIIQKAYRLYMLKSNAKKATSLA
HQIVCNGAIGNLEVPDGKVHFD
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagaagataagatggcctgccctgtgatcttcccagatgctcgtaacttccac
ctcttcactcctgattccctggctatgattgagaaactgattgccgcagagaaactgaag
aagaaaacccaggacccgtcaggatttgaagtttctcctcggcctcagctcgacttgaaa
gtatccaggaagctgcccaagatttatggagacattcctcctgaggttgtggggaagcct
ctggaagaccttgaccctttctatgtgagccacaagacattcatggtgttgaacaaaaag
aggacaatctaccgcttcagtgccaagccagccttattcattcttgggccttttaaccca
atcaggagactggccattggcatctcagtccattcgttattcagcatgttcatcatatgc
actgttattgtcaactgtgtcttcatggcaacaccaaatgattataataaagatgctgag
tatgtttttactgccatctacatttttgaagcattgattaaaataatagcaagaggactt
tttctggatgaattcacttaccttcgagatccatggaactggttggatttcgttgtcatt
atgctggcatttctttcatatatgagagaggaactggagagcgtgtcagctctaaggaca
tttcgagtcctcagggctctcaaagccatctcagtcatttcaggtttgaaggtcattgtt
ggggccctactgcgctcagtgaagaaactggtggatgtcatgattctgaccatcttctgt
ttgagcatttttgccttggttgctcagcagttcttcatgggaagtctgaggtatagatgt
atcaaaaagacctgcttgagaatctccatgcccttcctttatacagaaaactgcactgaa
aataaaagcgaaggctcatctgaaaaaagattatgtggcttctggatggggaatagttca
tgttgccctggttttttttgctgtaaaactaagatgagtcctgattataattttacaaac
tttgacaattttggttgggcctttctcagcatgttccgtgtgatgactcaagattcctgg
gaacgcctttatcagcagacccttcgagctgctgggccattggctgtggtcttttttgtg
gtcgtcatcttcctgggctctttttacttgatcaacctgaccttggctgttgtcaccatg
tcttacgaagaacagaacagaaatgtggcagcggagacagaagccaaagagaaaatgttc
agagaggctgtggagctgctaaagcaggagcaggagactctagttgctatgggaattgat
aggagttcactcagttctcttgaaacatcatccatttcttgccaaaagaaaagcctgttc
agcaacaagagaaggaaatctttccttgtgggcaattctgggcgagaccaagcaccacta
tctgatcctgatgaaggaatccaaacaaagcagcagctattgaaccaaacgaagcgcctc
tcccagaatctgtctgtggattattgggatgaccacggcgacacctttcagaggcaacgt
gccctgagcgccgtcagcattgtcaccatcactatgcaggaatacgaaaagtcacaacag
aaatatcttccctgtcagagcaactttgtctccaaatactgcatttgggagtgttgtccc
ctgtggctacgcattaaaaggattgtggaactaattatcacggatccctttgctgacctg
gttatcaccatttgcatcattgtcaacactgtattcatggcaatggagcatcacaaaatg
gatgacaactttaagaaaatgctgaacacaggaaattatgtttttactggaatttttgtc
acagaaatgttcttcaaaatcattgccttggatccatactattattttctccgtccctgg
aacatttttgacagcattattgttgttctgagtcttatggaaataatcttaactgtgggt
gtatcaaatttgtcactattacgttccttaagactgctgagagttttcaagttagccaaa
tcctggccaacattgaatactcttattaagattattggccactccgtgggcgccctgggt
aacctcactctggtcctggccatcatcgttttcatcttctcagtcgttggcatgcagctt
tttggaccttttttcaagtctgagaaaattcgggaacggcgttggcacatgggagacttc
ttccactctttcctggtcgtgttccgcattctctgcggtgaatggattgacaacatgtgg
gaatgtatgcgtgagtctcgtcatcatcatgtgctgtgcattctggtcttcttgctgatc
ttggtgataggaaacttggtggtactcaatcttttcattgccctgctgctcagctccttc
agcagagaagaaagagaagggaatggggctggagaggtgaggaagaccaagctgcagctt
gcttttgatcggttccgcagggcgtttcattttgtgaaacgtgccatttggcaattttgc
agcagttctttcaggaagcaaaggtttagaaagtcaaaggacatgtccaaaaagcacaag
gctcagaataaagatgtaattccactggagtcaagaataagccgagagcaagcaaaccat
gaaaaactttgctctcaggaggagaccagtccccctgggttgacaggcttgggctgtata
caggaaaatgtgaataccaggcactcttcacttattaaagccccactggctgaagaagag
gaagatggagataatgactgtctagatgacccccaggatttcatggaagcagagtttcat
gagcagaagtttgatgaaatcagctatgtgtctaattgtagcaccattgatctgagggat
cccaaactgtgggttcctgaaatggttcctgaaaaaggacctgagagatgttttcccaaa
ggtaaggacaagtgcttcccctgctttgcactgaatgtaagaaagtcttctggaatcctt
tggcggaacctgagggtaacctgctacagaatcgtcaagcataactggtttgagagcttc
attatcttcatgattcttctgagcagtggagctctgatatttgaagattgttacatttca
tcaagacccaccattaaggagttactgaaatttaccgataaggtttttacctacattttc
atcttcgagatgtttttgaaatgggtggcatatggatttaggaagtatttcacaaatgca
tggtgcgttctcgacttcatcattgtaattgtctctatcataagccttatctctgaattt
ttaaaaccaaaattgtcttctaatgttaaatcccttcggacactgagagccttgaggccc
ttgcgagcactgtcccagtttgagggaatgagggttgttgtcaatgcccttgttggggcc
atccctgccattttaaatgttctgctcgtctgtctcattttctggctcatcttctgtatg
ctaggggtgaaccttttttctgggagatttggaaagtgcatcgaccaaaccaaaaaagaa
gctataaactacaccattattaacaacaagtcaatgtgcacaaatgagagatacccaggt
gcatgctggactaacgctaaagtcaactttgataatgttggaattggttacttggctctt
ctacaggtggctactttcaaaggttggatggaaattatgtatgctgctgtagattccaga
ggggaagatgaacagcccgcatttgagtacaatatgattgcatatctctacttcgttgtt
tttataatttttggttcattcttcacactgaatctttttattggtgtaatcattgacaac
tttaaccaacagcaaaaaaagttaggaggccaagatatcttcatgacagaggagcagaaa
aaatattacaatgcaatgaaaaaactgggatcaaagaaaccccaaaaacctgttccaaga
cctttgaacacatgccaagcttttgtgtttgatgtagtcacaagccaggcctttgacatt
ttcatcataattctcatttgccttaatatgatcatcatgatggcagaaacagactctccc
gaaggagacaatacacaaaaggcacaacttctagaaaccctcaactccgtctttgtactc
atcttcacagttgaatgtctcttgaaaatctttgctctgaggcaatactactttgctaat
ggttggaacttatttgattgtgtggtcgtggttctctctatcattagttttttggtttct
ctactggaatcgagaacgacaattccgttccctcctgtgctcttcagagtcattcgcttg
gctcggattggccgaatcctcaggcttgttcgagcagcgaaaggaatcaggactcttctt
tttgcactgatgatgtcacttccttccctattcaacattggacttctgctctttctggtc
atgtttatctatgccattattggtatgactaatttttcaaacgtgagatatgaggcgggg
attgatgacatgttcaactttcgaaccttcggcagcagcatgctctgtcttttccaaatc
actacatccgcaggctgggacgccctcttaagtcctatgttgagttcaagattttcatct
tgtggctcagagaactcttgtagttctgaaaatagtgactgtgtgagctctgtcatggca
attacattctttgtcagttatatcattatctcctttctaattgttgtaaacatgtacatt
gctgtgattttagaaaacttcaacacagccactgaagagagtgaggatcccttaagtgag
gatgactttgacatattctatgaaacttgggaaaaatttgatcccgaagcaacacaattc
attgaatactcagcactctcagactttgcggatgccttgccagatcccttacgtgtggcc
aagccaaacagaaatcaacttctagtgatggacctgcccatggtcagtggcaatcgactt
cactgcatggatatactgtttgcttttaccacaagagtactggggaactcagaaggtata
gattgccttaaaagccagatggaagagaaattcatggaggccaatccttacaagaagtta
tatgaaccaattgtgactaccacaaagcgcatggaagaagagagatgtgctgctatcatc
cagaaggcctatcgactatacatgctgaagagtaatgccaagaaagcaacttccttagca
catcagatagtttgcaatggagccattggtaacttagaagtacctgatggcaaagtacac
tttgactga
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integrated database retrieval system
