Petaurus breviceps papuanus (sugar glider): 138158850
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Entry
138158850 CDS
T10505
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138158850 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrv03019
]
138158850 (SKIC3)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
138158850 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_12
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_17
ANAPC3
ARM_TT21_C
TPR_9
TPR_15
TPR_30
Fis1_TPR_C
TPR_20
BTAD
SLATT_6
PknG_TPR
ARM_TT21_2nd
ChAPs
TPR_22
Motif
Other DBs
NCBI-GeneID:
138158850
NCBI-ProteinID:
XP_068941225
LinkDB
All DBs
Position
Unknown
AA seq
1573 aa
AA seq
DB search
MIVVQRMSNKQVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELE
QPDQAQGAYKKAAELEPDQLLAWQGLASLYEKSNYTDTKEDLITVYQKLLDLYESVDKQK
WCDVCKKLVDLYHQEKKYLEVAQTWDRLIKTRKEDGAENQEVYQLWIKLTQLLAESTEEE
NDEIQQLLFTAFENALSSSDNIPSEDHEILYRHFIQCLAKFPHETARMKKACEGMMNIYP
SVSYPLEMLCLHLIQSGSFTDEALQYCYQLVEKNSESGPGLIGLGIKALQDKKYEDAAKN
LTEGLKLSSVCIVGWYHLAETQVKMHHYKEAILSCNQALKTIENLSAPGKSVHQKNLCLR
LKAEALIKLSDHDSSEEAIATLEQVSDANNIPELLVLKGLAYLNKGLTDKTSKIVEELLS
SYPNLAAVHALEALIHFTRKDYPEAEKGFQSALDREAEVADYYYYLGLTYWFMSEDTRKD
KTKALTQFLKAAKLDTYMGQVFRYLGHYYREVVGDKSRARGCYRKAFELDETDEESGAAA
ADLSVELEDTDTALVILTTVTKKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRAD
PKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESIYSVFKVAAIQQILGKYKEAVAQ
YQQIIKKKEDYVPALKGLGECHLMMAKGMLTDYLDGKAVDHIEQALDYFTWALQYRSDVS
CIWKLIGDACTSLHVVSSSKVNVNVLGVLLGQKEGKQILKKHELLHLGGRCYGRALKLMP
TANTWCDLGINYYRQAQDLETGSCVNELKELLEKSLHCLKKAVRLDSNNHLYWNALGVVA
CHSGIGNYALAQHCFIKSIQAEQINAIAWTNLGVLYLANENIQQAHEAFKIAQSLDPSYL
MCWIGQALIAETVGSYDTMDLFRHTTELNMHTEGAIGYAYWVCTTLQDRTNRETELYRYN
ILQMNAIPAAQVVLSKYTERIQNYAPAFTMLGYLNEYLQLKKEAADAYQRAISLLQNEEK
QEIYNVTARNYGRLLCAIGEYDKAIHVFKSTPLEEFDDIIGLALALFKKGLFQESNKAYE
RALSIVESEQDKAHVLTALAITEYKLNKMDMAKTLLFKCSILKEPTTESLQALCALGLAM
KDATLSKAALNELFKHVKQKDDNYQKCLITSAVYALQGRNVSVQRQVSKAVHSNPADPAL
WSLLSRVVPQYTPRNAQGGAVAGNVAHILDSNHGKALLYTAVNQLAMGSNSAEDEKNDPL
KTIQKAVLLSPDDPAVWAGLMAACYADNTLALLNNTKPRRTELDLALLATVSATVKEKDL
PENYGQTIEKWSLCQALTSLIEKGKISEAETLCTKHLKSSHDQPAVFLLLRQIQCKPLLQ
AQKRLPDAVLEELQKAVMSNSASSSAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQGNW
NGKLSSLLRLALLALEVCRADVSNDHWPSLVQEATAEALKLCFCPLALLLQALLQFHRKM
GARETRRLLERVVYKPGYPKSMVSFARWYLLRHLYAKDDYELIDMLVDNAKAHGDTRALE
LNQKLSSSSSSSK
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgatagtggtccaaaggatgtcaaacaagcaggtgaagacagcattgaaaagtgccaga
gatgcaataagaaacaaagaatataaggaagctttaaaacattgtaagactgtattgaag
caagagaagaataactacaatgcctgggtatttattggagtggcagcagctgaactagaa
cagcctgatcaagcacagggggcctacaagaaagcagctgaactagaaccagaccagtta
ttggcctggcaggggttagccagtttatatgagaaatctaactatacagataccaaagag
gacttgatcactgtctaccaaaagcttttggatctctatgaaagtgttgacaagcagaag
tggtgtgatgtctgtaagaagcttgtggatctttatcaccaagaaaagaaatacctggag
gtggctcaaacatgggacagactgattaaaacaagaaaggaagatggtgcagagaatcaa
gaggtttaccagctgtggataaagttaactcagttacttgctgagagtaccgaagaagaa
aatgatgaaattcagcaactgcttttcactgcatttgaaaatgctttgagctcttcagat
aacattcctagtgaagatcatgaaatactttatagacacttcattcagtgtttggctaaa
tttcctcatgagactgctaggatgaagaaagcatgtgaaggtatgatgaacatttatcct
agtgtatcttatccattggaaatgctttgcttacatttaattcagtcaggaagtttcact
gatgaagccctgcagtactgttaccagctggtggagaagaattcagaaagtggtcctggc
ctcattggcttaggcataaaagcgctacaagacaaaaaatatgaagatgctgccaaaaac
ttaacagaagggttaaaattaagcagtgtctgcatagtaggatggtatcatctggcagag
acccaagtgaaaatgcatcactacaaagaagctattctttcctgcaatcaagctctgaag
acaatagaaaacctcagtgcacctggtaaaagtgttcatcagaagaacctctgccttcgt
ttgaaagcagaggccttgataaagctttcagatcacgactcttcagaagaagcaatcgcc
actctagaacaggtctcggatgcaaataatattccagagcttttagttctcaaaggtctt
gcttatctaaacaaaggcttaactgataaaacttcaaagattgtggaagaacttctttcc
tcttaccctaacctagctgcagtccatgccctggaggcactgattcattttaccagaaag
gactacccagaggcagagaaaggatttcagagcgctcttgacagagaagctgaggttgct
gattattattactatcttggattaacatattggttcatgagtgaagatacaagaaaagac
aaaacaaaagctcttacccagtttttgaaggctgcaaaattggacacatacatggggcag
gttttccgctacttgggacactattacagggaggttgttggagataagagcagagcccgg
gggtgttacagaaaagcttttgaactggatgagacggatgaagaatctggagctgctgca
gcagatttaagtgtggagctcgaggatactgacactgctttggtaatcttaacaacagta
actaaaaaggcaagtgctggaacagcaaaatgggcctggcttagaagagggctctactat
ttgaaagctggtcagcattctcaagcagtggctgatttacaggcagcattgagagcagac
ccaaaggacttcaactgctgggagtcattgggagaggcctacctgagtagaggtggctat
acgacagctctgaaatccttcacaaaagccagtgaactcaacccagaatctatctacagt
gtgtttaaggttgcagcaatacagcagatcctaggcaaatataaagaggctgtagctcag
tatcagcagatcataaaaaagaaagaagattatgtacctgccctgaaaggtcttggtgag
tgtcatcttatgatggcaaagggaatgctgactgattatcttgatgggaaagctgtggac
cacattgaacaagccttggattactttacttgggctctccagtatcgatcggatgtttct
tgtatttggaagctcattggagatgcatgtaccagtttacatgtggtttcatcatctaaa
gtgaatgtgaatgttctaggagtccttctgggacagaaagaagggaaacaaatattgaag
aaacatgaacttctccatctagggggaaggtgctatggccgagcattaaaactgatgcct
acagctaatacatggtgtgatcttggaataaattattatcgtcaagcacaggatctagaa
acaggaagctgtgtgaatgaacttaaagagttattggagaaatctttacattgtctgaaa
aaggcagtgagactggatagcaataaccatttgtattggaatgcccttggtgtggttgct
tgtcacagtggcattggaaactatgctcttgcccaacactgtttcatcaaatcaatccaa
gctgaacaaattaatgctattgcatggacgaatttgggagttttatatctagcaaatgaa
aatatccagcaagctcatgaagccttcaaaattgctcagtcccttgatccatcttactta
atgtgttggattgggcaggctcttattgcagagacagttggaagttatgacacaatggat
ctctttcggcatacaactgaactcaatatgcatacagagggagcaataggctatgcctat
tgggtctgtacaacactgcaagatagaacgaacagagaaacagagctgtatcgctataac
atcctccagatgaatgccattccagcagcacaagttgttttgagcaaatatacagaaaga
attcagaattatgctccagcttttacaatgttgggttatttaaatgaatatcttcaactg
aagaaagaggcagctgatgcatatcaaagggcaatttcattactacagaatgaagaaaaa
caagaaatctataatgttacagcaagaaattatggccgcttgttatgtgctattggtgag
tatgataaagccatccatgtttttaagtcaacccctctggaagaattcgatgacatcata
ggtcttgcactggctttattcaagaaaggacttttccaagagagcaacaaagcctatgag
agagccttgtccattgttgaatcagagcaggacaaagctcatgtcctgacggccctggca
ataacagaatacaaactaaataagatggacatggccaagacattactattcaaatgttct
atcttaaaggaaccaaccactgaaagtcttcaagcactctgtgctctgggactggcaatg
aaggatgccactctctcaaaagcagcacttaatgagttatttaagcatgtaaaacagaag
gatgataattatcagaagtgccttattacatcagctgtttatgcattacaaggtcgaaat
gtgtcagtgcagagacaagtgtccaaagctgtccacagtaacccagcagaccctgccctt
tggtctctattatcccgagtagtacctcagtatactccacgaaatgcacaaggtggagct
gtagcaggaaatgtggctcatatacttgactcaaatcatggaaaggccttactgtatact
gctgtcaatcagctggcaatgggaagcaattcagcagaagatgaaaaaaatgatccatta
aagaccattcagaaggcagtcctattatctccagatgatcctgctgtctgggcaggccta
atggcagcctgttatgctgacaacactttggctctcttaaataacacgaagccaaggagg
acggagctagatctagcactgttagccactgtttctgctacagtcaaagaaaaagacctt
cctgaaaactacggtcagactattgaaaagtggtctctttgtcaagctctcaccagtttg
atagaaaaagggaaaatttcagaagctgagaccctctgcacaaagcatttaaaaagtagc
catgaccaaccagctgttttcctgctcttaaggcagattcagtgtaagcctctgctgcag
gcacagaaacgtcttccagatgctgtcctggaagagctgcaaaaagcagttatgtccaat
tcagcatcttcttcagcttggcagtggttagcacaggtatatcagtcacagggaatgatg
ggtgctgcagagatgtgctacagaaagagtctccaggtggcatcccagcagggtaattgg
aatggaaaactctcaagtttactgagactggcattacttgccctggaagtctgcagggct
gatgtttcaaatgatcactggccatctttagttcaggaagctacagctgaagcactgaaa
ctttgcttttgcccactggctcttctgttgcaagctctgttacaatttcaccgcaaaatg
ggagcaagggagacacggcggttgttggagagagttgtgtataagcctgggtatcccaaa
tccatggtatcatttgcacgctggtacctgctgagacacttgtatgccaaagatgattat
gaactcatcgatatgcttgtagacaatgccaaagcccatggagacaccagagcactagaa
ctgaatcagaaattgtcgtcgtcatcatcatcatcaaaatga
DBGET
integrated database retrieval system
