Petaurus breviceps papuanus (sugar glider): 138162599
Help
Entry
138162599 CDS
T10505
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
138162599 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbrv03400
]
138162599 (LIG3)
Enzymes [BR:
pbrv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138162599 (LIG3)
DNA repair and recombination proteins [BR:
pbrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
138162599 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
138162599
NCBI-ProteinID:
XP_068946031
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MPLALAVLFQQTCRVLGRREVPHLLQEPLRCQLSSPSSTVSGAGHFHGSRLLVKRKSSLW
FKGGIPGPCTARFAFLPVSHVGFCTSASEMAEQRFCVDYAKRSTAGCKKCKEKIVKGVCR
IGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELQDTEKDQIS
EHISALSSKAASTPKKKATVQAKLTPTGQVISPHKGASSVTNTNPRKFSGFTAKPSTSEG
ALSRPTPKPTLSAGRCDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIHDFLQKGSGGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSQDDMIRDLEQGDVSETVRVFF
EQSRSFPPAAKSLLTLQEVDEFLLRLSKLTKEDDQQNVLQSIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLANQQESEKAPGMKRTLSVQAALM
TPVQPMLAEACKSIDYAMKKCPNGMFSEIKYDGERVQVHKKGDQFSYFSRSLKPVLPHKV
AHFKDYIPQAFPGGQSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDISLMDRPLYERRKFLHDNMVEIPNRILFSEMKQVTKASDLADMINRVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDP
SSQKWCTVTKCSGGHDDATLARLQNELDMVKISKDPSKIPSWLKINKNYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKSATSLPQLKELYQLSKEKADF
TVMAADEGSSVTSGSSGENEGSSGPSTPRRASKASSSKAPAQAKKAERKQNGPPIKVGNK
STVRPSLEKVEPKKGEKRKAPEEDTSYKKTLLDIFTGVRLYLPPSTQDFSQLRRYFVAFN
GDLVQEFDTASATHVVGSGDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggctttagccgtcctcttccagcagacttgcagagttcttggccgaagagaa
gtaccccatttgctccaagagccattacgttgccagttaagtagcccatcctccactgtg
tcaggagctggtcactttcatgggtcccggcttcttgtgaagaggaagtcttctctctgg
ttcaaggggggcatccccggaccatgtactgcccgctttgccttcctgccagtgtcacat
gtggggttctgcaccagcgcttctgagatggctgaacaacgattctgtgtggactatgct
aagcgcagcacagctggctgcaagaaatgcaaggagaagatagtgaaaggcgtgtgccga
ataggcaaagtggtgcccaaccccttctcagaatctggaggcgacatgaaggagtggtac
cacatcaagtgcatgtttgaaaaactggaacgggcccgggctaccaccaagaagattgag
gacctcacagaactcgagggctgggaagaactgcaggacacagaaaaggatcagatcagt
gagcatatttcagcactttcctcgaaggcagcaagcacaccaaaaaagaaagccacggtc
caggccaagctgacacccactggccaggtgatttctccacacaaaggagcctcctcagtc
actaataccaatccccggaaattttctggtttcacagctaagccaagcacctctgaggga
gccctctcacggcccacacccaagcccaccctgtcagctggacggtgcgacccaaagcac
aaggactgcttgttgcgagagtttcggaaactgtgtgccatggtggccgacaagcccagc
tacaacgtgaagacccagatcatccatgacttcctgcagaaaggatcaggcggcgatggt
ttccatggcgatgtgtacctgacagtgaagctcctcctgccaggtgtcattaaaagcgtt
tacaatctgaacgacaaacagattgtgaagcttttcagtcggatttttaactgcagtcag
gacgacatgatccgggatttagagcagggagacgtgtcggagacagtgcgtgtgttcttc
gagcagagccgatcctttcccccggcagccaagagccttctcactttacaagaagtagat
gagttccttctccggttgtccaaactcacaaaagaagacgaccagcaaaacgtgctgcag
agcattgcctctaggtgtactgccaacgacctgaagtgtatcatcagactcatcaagcat
gacctcaagatgaattctggtgccaagcacgtgttggatgccctggaccctaatgcctat
gaagctttcaaggcctcaaggaatcttcaagatgtggtggagcgtgtcctggcaaaccag
caagagtccgagaaggcacccggcatgaagcggacactcagcgtccaggcagctctcatg
acccctgtgcagcccatgctggccgaggcctgcaaatccattgactacgcaatgaaaaag
tgtcccaatgggatgttctcggagatcaagtatgacggggagcgggtgcaggtgcacaag
aagggggatcagttcagctacttcagccgaagcctcaagcctgtcctgcctcacaaagtg
gcccattttaaggactacatcccccaggcattcccagggggccagagcatgatcctagat
gctgaggtccttctgattgacaccaaaacaagcaaacctttgccctttgggactctaggt
gtgcataagaaagctgctttccaggatgccaatgtgtgcttatttgtgtttgattgcatc
tacttcaatgacatcagcctgatggacaggccattgtatgaacggcggaagtttctccat
gacaacatggttgaaatccccaaccggatcctcttctctgaaatgaagcaggtcacaaaa
gcatcagacttggctgatatgatcaaccgcgtcatccgggaagggctagaaggcttggtg
ctaaaagatgtgaagggcacctatgagccagggaagcggcactggctgaaagtgaagaag
gactacctgaacgagggggccatggcagacaccgcagatctagtggtccttggggccttc
tatgggcaaggaaacaaaggtggcatgatgtccatcttcctgatgggttgctatgacccc
agcagccagaagtggtgcacggtcaccaagtgttccgggggccatgatgatgccaccctt
gctcgcttgcagaatgagctagacatggtgaagatcagcaaggatcccagtaagattcct
agctggctgaagatcaacaagaactactaccctgatttcattgtcccagacccaaagaaa
gctcctgtttgggagatcacaggggcagaattctccaaggctgaagcccacacagccgat
ggcatctctatccgtttcccccgctgtacccgaattcgtgatgataaagattggaagtcc
gccaccagcctcccacaacttaaggagctgtaccagctttccaaggaaaaggctgacttc
actgtgatggctgcagatgaggggagttctgtgactagtggcagcagtggagagaatgag
ggcagctcaggcccttccactcctcgaagagcctccaaggcatcctccagtaaggcccct
gcccaagccaaaaaggcagaaagaaagcagaacggcccccctattaaagtaggcaacaaa
tcaactgtgaggccttcccttgagaaagtggaaccaaagaagggggagaaaaggaaggca
cctgaggaagacacaagctacaagaagacgctactggacatcttcacgggtgtgcggctt
tatctgccaccctccacacaggatttcagccagctccgccgctacttcgtggcatttaat
ggggatctggtccaagagtttgacacagcctcagctacacatgtggtgggcagtggggac
aagaaccctgaggcacaacaggtttcccctgaatggatctgggcatgtatccgaaaaagg
agattggtggcaccgtgctag
DBGET
integrated database retrieval system
