Petaurus breviceps papuanus (sugar glider): 138165353
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Entry
138165353 CDS
T10505
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138165353 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrv03019
]
138165353 (XAB2)
03041 Spliceosome [BR:
pbrv03041
]
138165353 (XAB2)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138165353 (XAB2)
Spliceosome [BR:
pbrv03041
]
Complex B
Other components
Prp19-related factors
138165353 (XAB2)
Complex C
138165353 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
TPR_12
TPR_8
Suf
TPR_19
TPR_15
TPR_16
ARM_TT21
ARM_TT21_C
TPR_MalT
TPR_1
RPN7
Motif
Other DBs
NCBI-GeneID:
138165353
NCBI-ProteinID:
XP_068949736
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MPEIGEAAPAEANLKARPERPDLFFEEEDLQYEEEILRNPFSVKCWFRYIEFKQSASQAV
LNLLYERALKELPGSYKLWYHYLKARRAQVKRRCVTDPAYEDVNNCHERALVFMHKMPRL
WLDYCQFLMEQGRITRTRRTFDRALRALPITQHSRIWPLYLRFVRSHPLPETAVRVYRRF
LKLSPESAEEYIEYLRSIDRLDEAAQRLATVVNDERFVSKEGKSNYQLWHELCDLISQNP
DKVQSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDF
TQVFDSYAQFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQ
NPHHVHEWHKRVALHQGRPREVINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLD
DARTILEKATKVNFKQVEDLASVWCEYGEMELRHDNYDQALRLLRKATALPARRAEYFDG
SEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYERILDLRIATPQIVINYAMFLEEHK
YFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYA
KTLYLLYARLEEEWGLARHAMAVYERATRAVEPSQQHEMFNIYIKRAAEIYGVTHTRSIY
QKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGTFWQTWKDFEI
RHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGMDDMKLL
EHRAEQLAAEAQRDQPPHSQSKILFVRSDASRTELAELAQQANPEEIEIGEEEEEEEEDL
QPNEVSLEQQSVPATVFGSLKED
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatcggggaggcagccccagccgaggcaaacctgaaggctcggcccgagagg
cccgacctcttctttgaagaggaagatttgcagtatgaggaggaaatccttcgcaacccg
ttctctgtcaagtgttggtttcggtacatcgagttcaagcagagtgcatcgcaggctgtg
ctcaatctgttgtatgagcgagccctcaaggagctgcctgggagttacaagctatggtac
cactacctgaaagcccgccgggcccaggtgaagcgtcgctgcgtgactgaccctgcctac
gaggatgtcaacaattgccacgagcgggccttggtcttcatgcacaagatgccacgtctg
tggttggattactgccagttcttgatggagcagggccgcatcactcggacccggcgcacc
ttcgaccgtgccctgcgggctctgcccatcactcagcactctcgcatctggcccctctat
cttcgctttgtacgttcccacccccttcctgagaccgcagtgcgtgtgtaccgccgcttc
ctcaagctgagccctgagagtgcagaggagtacattgagtacctgcgctccattgaccgg
ctggatgaggcagctcagcgcctggcaaccgtggtcaatgatgaaagatttgtctccaag
gaaggaaagtccaactaccagctgtggcatgaactgtgtgacctgatctcccaaaatcct
gacaaagtgcaatccttaaatgtgggcgccatcatccgagggggcctcacccgcttcact
gaccagctgggcaagctctggtgctcgctggccgactactacatccgaagtggacatttc
gagaaggcccgagatgtgtacgaggaggcaatccagacagtaatgaccgtacgagacttc
acacaggtcttcgacagctatgcccagtttgaggagagcatgattgcagccaagatggag
acaacttcagagctagggcgggaggaagaagatgacgtggacctggagctacgtttggca
cgctttgagcagctcatcagccgccggcccctcctcctcaatagcgttctgctacgccag
aacccccatcatgtgcatgagtggcacaagcgagtggccctgcatcagggccggcccaga
gaggtcatcaacacatatacagaggctgtgcagaccgtggatcccttcaaggccacaggc
aaaccccacacactgtgggtcgcctttgccaagttctatgaggataacgggcagctggat
gatgcccgcaccatcctggagaaggcgaccaaagtgaacttcaaacaagtggaggacttg
gccagtgtgtggtgtgaatacggcgagatggagctcagacatgacaactatgaccaggcc
ctgcggctgctgcggaaggcaactgccctgcctgcccgccgggccgagtattttgatggc
tctgagcctgtgcagaatcgggtctacaagtccttgaaggtgtggtctatgctggctgac
cttgaggaaagtctgggcaccttccagtccactaaggccgtgtacgagcggatcctggac
ctgcgcatcgccacaccccagatcgtcatcaattatgccatgttcctggaggagcacaaa
tactttgaggaaagcttcaaggcctacgagcggggcatctcactgtttaagtggcccaac
gtgtcagacatctggagcacatacctgaccaaatttatcgcccgctatggaggccgcaag
ctggagcgggcccgggacctgtttgagcaggcgctggatggctgcccccccaaatatgcc
aaaactctctacctgttatatgcccggctagaggaagagtggggtctggcccgccatgcc
atggctgtgtatgagcgtgccacccgtgccgtggagccctcccagcagcatgaaatgttc
aacatctacatcaaacgtgctgctgagatctacggtgtcacccacacccgcagcatctac
cagaaagctatcgaggtgctgtccgatgagcacgcacgagaaatgtgtcttcgctttgct
gatatggagtgtaaactgggggagattgaccgggcccgggccatctatagtttctgctcc
cagatctgcgatcctcggacaacaggaacgttctggcagacgtggaaggactttgagatc
cgtcatgggaatgaagacaccatccgtgagatgcttcggatccggcgaagcgtccaggcc
acgtacaacacacaggttaacttcatggcctcccagatgctgaaggtgtacagcaacgcc
acaggcactgtgtctgacctcgcccccggacagagcgggatggatgacatgaagctgttg
gagcatcgggcagagcagctggcagcagaggcacagcgggaccagcctccccactcacag
agcaagatcctctttgtcaggagtgacgcctcccgcactgagctggctgaactggcccag
caggccaaccctgaggagattgagataggggaggaggaggaggaggaagaggaggacctg
cagcccaatgaggtgtcgctagagcagcagagcgtgccagccaccgtcttcgggagcctg
aaagaagactga
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