Petaurus breviceps papuanus (sugar glider): 138165916
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Entry
138165916 CDS
T10505
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138165916 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrv03019
]
138165916 (DCP1B)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138165916 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
138165916 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
138165916
NCBI-ProteinID:
XP_068950419
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSAVGILEERDGSLARFTCPGALYRGPGFLSLFLECGQVRASRRSIGRVCPVHRVDVREG
GKMAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGT
LFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYNKE
ECQRIAELMKSLTQYEQLKAHQGARAGISPMILNSGEGKEVDILRMLTKAKDEYTKCKTC
SEPKQITSSSAIYDNPHLIKPIPVKPGEGQHQRAPQQGQNLDPEPQHLSLTTLFGKPDKT
TYQEVTEQKSQLLPPTPQQQQEKPPTRQGAVRSLSYEEPKRNSPTPEKQLCPAIQKLMVR
GTDLHPVSELPEARLCENGSVHPVGEVFTGLFQPVTPHSMGTSHRVQSTSGAQSLLEKLQ
GTPGSVSKLESNTTMPPSSAAPIFSRSSTPAAPAAQIKSMGQPQLVYFNGSLPPQTLGPQ
TLRKEESKVSRQTLPLSGNQTSSSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVV
SQNVKTLKPLEAWIDKPSSTEKQTPLFQQVISPQHIPATVTPSLLMSPMVFSQPTPSSPK
VSESGLLPLGSKEPSAATTSLFLPIQNTEASVINNNLLTKLQLQETLLHLIQNDDNFLNI
INEAYLFSVTQAAMKKTTM
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgtgggaatcctggaggagagggacggatccctggctcgcttcacctgccct
ggagcactgtatcgagggcctggtttcctctctctctttttagaatgcgggcaagttcgc
gcttctcggcgttcgattggccgcgtctgtccggtccaccgtgttgatgtccgggaggga
gggaagatggcggcggtagctgctggtggcctagtgggcaagggacgggacatcagtttg
gcggccctgcagcgccacgacccctatatcaaccgcatagtggacgtggccagccaggtg
gccctgtacactttcggccatcgggccaacgagtgggagaagactgatgtagaaggaacc
ctgtttgtttacacaaggtcagcttctcccaagcatggattcactattatgaataggctg
agcatggaaaataggactgaacccatcactaaagatctggatttccaacttcaggatcct
tttcttctgtataggaatgccagattgtccatttatggaatttggttttataataaggaa
gaatgccaaagaattgcagagctcatgaaaagcctgactcaatatgagcaactgaaagcc
catcagggggctagagcaggaatctccccaatgatcctcaattcaggagagggcaaggaa
gttgatatcctacgaatgctcaccaaggccaaagatgaatataccaagtgtaaaacatgt
tctgagccaaagcagattaccagttcatctgccatctatgacaacccccatctgataaag
cccattccagtgaagcctggtgaaggccaacaccagcgtgcccctcagcaaggccagaac
ttagatcctgaaccacagcacttatccttgactacactctttgggaaaccagataaaacc
acttatcaggaagttacagagcagaaatcacagctactaccaccaacaccacagcagcaa
caagagaaacctcccaccagacaaggggcagtacgttccctttcctatgaagaacccaaa
agaaattcaccaaccccagagaagcagctttgtccagccattcagaaactcatggtccgg
ggcacagatctccatccggtgtcagagctgcctgaagctcgactatgtgaaaatggcagt
gttcaccctgtaggagaggttttcactggtcttttccagccagtgaccccacatagtatg
gggacatctcacagagtacaaagtacatcaggagctcagagccttttagagaaacttcag
ggtacccctggatcagtaagcaagttagagtccaatactaccatgcctcctagttcagct
gcaccaattttcagcaggagttctactcctgctgcccctgcagcacagataaagagcatg
ggccagccacagctggtgtacttcaatggctctcttccacctcagactttgggacctcag
actcttagaaaagaagagtctaaagtgtcaaggcaaaccctccccctctctggcaaccaa
acaagcagttctggagtgatctctcctcaagagttgctgaaaaagctccagatcgtacag
caggaacagcagttgcatgcatctaacagacctgccttagctgctaagtttcctgtagtt
agccaaaatgttaagactctgaaacccttggaagcctggatcgacaagccatctagtaca
gaaaaacagacccctctttttcagcaggtcatctcaccccaacacattcctgctactgtg
actccttctctgctgatgtcccctatggtgttctcacagcctacaccttcctcacccaag
gttagtgagagtggattgttgccactaggaagcaaagaacccagtgcagctactaccagt
ctttttctgccaatccagaacacagaggcttctgtgattaacaacaacttgctgaccaaa
ctacagctgcaggaaacacttctgcacctcatccagaatgatgacaatttcttaaatata
atcaatgaagcttatctcttcagtgtcacacaagcagccatgaaaaagactactatgtaa
DBGET
integrated database retrieval system
