Petaurus breviceps papuanus (sugar glider): 138166888
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Entry
138166888 CDS
T10505
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138166888 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrv03041
]
138166888 (PRPF4)
Spliceosome [BR:
pbrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
138166888 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
138166888
NCBI-ProteinID:
XP_068951481
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MNYMIDHYTLLPFLCIGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLR
ALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGSSN
LKTARLWIANYSLPRAMKRLEEARLHKEIPETSRTSQKQELHKSLRSLNNFCSQIGDDRP
ISYCHFSPNSKLLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDKKD
VNLASCAADGSVKLWSLESDEPVADIEGHSVRVARVMWHPSGRFLGTTCYDRSWRLWDLE
AQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI
NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT
AKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgattgatcactatactctattgccttttctttgtataggggaagtcttt
gaaattgaagaacatatcagtgaaagacaagcagaagtgttggctgaatttgagcgaagg
aagcgagcccggcaaatcaacgtttccacggatgactcggaagtcaaggcttgccttcga
gccttgggtgaaccaatcacactctttggagagggccctgctgaaaggagagagagattg
agaaatattctctctgtggttggcacagatgccttaaaaaagaccaaaaaggatgatgaa
aaatccaaaaagtccaaagaagagtatcaacaaacctggtatcatgaaggatccagtaac
ctgaagactgctaggctgtggattgctaattattcacttcccagggcaatgaagcgcttg
gaagaagcccgtctccataaagagattccagagacatctaggacatcccagaagcaggaa
ctgcacaaatctctccggtctttgaataacttctgcagccagattggagatgatcgaccc
atttcctattgtcatttcagtcccaattccaaactactggccacagcttgttggagtggt
ctgtgcaaactctggtctgtgcctgattgcagtctcctgcacaccctaagaggccacaac
accaatgtaggagcaattgtttttcaccccaagtccactgtttccttggacaagaaagat
gtcaacctagcctcttgtgctgctgatgggtctgtgaaactgtggagtctggagagtgat
gagcctgtggcagatattgaagggcattcggtacgtgtagcaagggtgatgtggcatccc
tcaggacgttttctgggcaccacctgctatgaccgttcatggcgcctgtgggacttggag
gcccaggaggagattctacaccaggagggccatagcatgggcgtgtatgacatcgccttc
caccaggatggttctttagctggcactgggggactggatgcatttggtcgtgtatgggac
ctgcgcacaggacgatgcatcatgttcctagagggccacctgaaggagatttatgggatc
aacttctccccaaatggttaccacattgcaactggcagtggcgacaacacatgcaaagtg
tgggaccttcggcagcggcgctgcgtctacactatccctgcccaccagaacttggtgact
ggagtcaagtttgagcccatccatgggaacttcctgctcactggtgcctatgacaacaca
gccaagatctggacgcaccctggttggtccccactgaagaccctggctggccacgaggga
aaagtgatgggtctggacatttcctctgatggtcagctcatagccacctgttcctatgac
aggaccttcaaactctggatggctgaatag
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