| Entry |
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| Symbol |
SMARCC1
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| Name |
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
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| KO |
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
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| Organism |
pbrv Petaurus breviceps papuanus (sugar glider)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pbrv00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138167178 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
138167178 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138167178 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pbrv03021]
138167178 (SMARCC1)
03036 Chromosome and associated proteins [BR:pbrv03036]
138167178 (SMARCC1)
Transcription machinery [BR:pbrv03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138167178 (SMARCC1)
Chromosome and associated proteins [BR:pbrv03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138167178 (SMARCC1)
PBAF complex
138167178 (SMARCC1)
GBAF(ncBAF) complex
138167178 (SMARCC1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1107 aa
MAAAAGGGGGGAPGAAAGGAGPGGAAAAAVGLALCRRKDGGPAGKFWESPETVSQLDSVR
VWLGKHYKKYVQADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGG
TLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPNIYLIPDI
ELKLANKLKDIVKRHQGTFTDEKSKASHHIYPNPTSLEDEDWLRPVMKKDKQVLVHWGFY
PDSYDTWVHASDVDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDENKKPVSF
RQRISTKNEEPVRSPERRDRKAAASTRKRKHSPSPPPPTPAESRKKTGKKGQASLYGKRR
GQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETV
TTGGKEDEDPSKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFN
GKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVN
YQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRTPQVPAAQQMLNFPEKNKEKPTDL
QNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDE
CILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAK
AALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLDGT
EEEKMETESDGQQAEKVENKGENEIDETDKTQDGENDKSIEKEQDSEVNEDTKSEEKDGE
ENKENDTCKERENDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQ
MEQQQHGQNAQQSHQHSGGPGMNPIGAPGHPGMLPHQQPPPYPMMHHQMPPPHPPQPGQM
PGPGSMMPGQPMPGRMIPAVAANIHPSGGGPPPPVMPPMPGNIIGPRVPLAAPNGMYPPP
PQQQPPPPPPTDGVTPPPAAAPASSAP |
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| NT seq |
3324 nt +upstreamnt +downstreamnt
atggccgcggcggcgggcggtgggggcggcggcgccccgggggcggcggcgggcggtgcg
gggccagggggcgcggcggcggcggccgtgggcctggcgctgtgtaggcggaaggacggg
ggcccggcgggcaagttttgggagagcccggagacggtttcccagttggactcagtgcgg
gtctggctgggtaagcactacaagaagtatgttcaagcagatgctcctacgaataaaact
ttggctgggctagtagtacagcttctgcagtttcaagaagatgcctttgggaaacatgtc
accaatcctgccttcactaagcttcctgcaaagtgcttcatggatttcaaagctgggggt
accttgtgtcacattctcggggctgcttacaagtataaaaacgaacagggctggagaaga
tttgacctgcagaatccttcccgaatggatcgtaacgtggagatgtttatgaacattgaa
aagacactagttcagaacaactgtctgagcagacctaacatctacctcattccagacatt
gaactgaagttggctaacaaactaaaggacattgtcaaacgacatcagggaacattcact
gatgaaaaatcaaaagcctctcatcacatttatcctaatcctacttcgctggaggatgaa
gattggttgagacctgtgatgaaaaaagacaagcaggtgctagtgcactggggattttac
ccagacagctatgatacttgggtccatgctagtgatgtcgatgctgaaattgaggatcct
cccattccagaaaaaccatggaaagtccatgcaaaatggattttagacaccgatattttc
aatgaatggatgaatgaagaagattatgaggtggatgagaacaagaaaccagttagtttt
cgtcagcgcatctcaacaaagaatgaagagccagtccgtagtcctgagagaagagatagg
aaagcagcagcaagtacaagaaagagaaaacattcaccttctcctccacctcctactcct
gctgaatcaagaaaaaagactggaaagaaaggacaagctagtctttatggcaagagacga
ggtcagaaagaagaggatgaacaggaagatcttactaaggatatggaagacccaacacct
gtacctaacatagaagaagtggtacttcctaaaaatgtgaacccaaagaaagatagtgaa
aatacaccagttaaaggaggaacagtagcagatctagatgaacaggatgaagagacagtg
acaacaggaggaaaggaagatgaagatcccagcaaaggagatcagagtcgatcaattgat
cctggtgaagataatgtaacagagcaaacaaatcatattattatccctagctatgcttca
tggtttgattataattgtattcatgtgatagaacgtcgtgctcttcctgagtttttcaat
gggaaaaacaagtctaaaactccagaaatatacttggcataccgtaatttcatgattgac
acataccgcttaaaccctcaagagtatttgaccagcactgcttgcaggcggaatttgaca
ggagatgtctgtgctgttatgagggttcatgcttttttagaacagtgggggctcgttaat
taccaagttgatccagaaagtcgaccaatggcaatgggacctcctccaactcctcacttc
aatgtccttgctgataccccttctgggctagtgcctcttcatctcagaacacctcaggtc
cctgctgctcagcagatgctaaattttcctgagaaaaataaggagaagcctactgactta
cagaactttggtctccgcacagacatttactccaagaaaaccttagcaaaaagtaaagga
gccagtgctggaagagagtggactgaacaggaaacactcctgcttttagaggcccttgag
atgtacaaagatgattggaataaagtatcggaacatgttgggagtcgaactcaggatgag
tgcattctccacttcctgagacttcccattgaggacccttatcttgagaactcggatgcc
tccctgggacctctggcttatcagcctgttcctttcagtcagtccggaaacccggtgatg
agcacagttgcgttcttggcatctgttgtagatccgcgggtagcgtctgcagcagccaaa
gctgccttagaggagttttctcgggtccgggaagaagtacctttggaattagttgaagct
catgtcaagaaagttcaggaagcagcaagagcctctggaaaagtagatccaacatatggt
ctagagagtagctgtattgctgggactggtcctgatgaaccagagaaacttgatggtact
gaagaagaaaaaatggaaacagagtcagatggacaacaggctgaaaaggttgaaaacaaa
ggagaaaatgaaattgatgaaactgataaaacacaggatggagaaaatgataagagtatt
gagaaagaacaagatagtgaagttaatgaggataccaaatcagaagagaaggatggtgaa
gagaataaggaaaatgatacctgtaaagagagagagaatgatactggaaagaagaaagtg
gagcatgagatttctgaaggaaatgtagccacagcggcagcagctgctcttgcctcagct
gctaccaaagcaaagcacctagctgctgtagaagaaagaaagatcaaatctctggtagcc
ctgctggtagagacacaaatgaagaaattggagattaaactccgtcattttgaggaactg
gaaacgatcatggacagggagaaggaggctttagaacagcagagacagcagttactcact
gaacgccagaacttccacatggagcagctaaaatatgctgaattaagggctcgccagcaa
atggagcaacagcagcatgggcagaacgctcagcagtcccaccagcattctggaggacct
ggtatgaacccaattggagcaccagggcatccaggaatgttgcctcatcagcagccccct
ccttatcccatgatgcaccatcagatgccccctcctcatccccctcaaccaggtcagatg
cctggtcctggttccatgatgcctggacagcccatgccaggccgtatgattccagctgtt
gcagccaatatccatccttctgggggtggtcctcccccacctgtcatgccaccaatgcct
gggaacatcattggaccacgagtaccccttgcagcacccaatggcatgtatccccctcct
ccacagcaacagcccccaccacctcctcctaccgatggcgtcactcctcctcctgcagca
gcaccagcctcctcggctccctaa |
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