Petaurus breviceps papuanus (sugar glider): 138167178
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Entry
138167178 CDS
T10505
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03082
ATP-dependent chromatin remodeling
pbrv04714
Thermogenesis
pbrv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138167178 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
138167178 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138167178 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbrv03021
]
138167178 (SMARCC1)
03036 Chromosome and associated proteins [BR:
pbrv03036
]
138167178 (SMARCC1)
Transcription machinery [BR:
pbrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138167178 (SMARCC1)
Chromosome and associated proteins [BR:
pbrv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138167178 (SMARCC1)
PBAF complex
138167178 (SMARCC1)
GBAF(ncBAF) complex
138167178 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
138167178
NCBI-ProteinID:
XP_068952032
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MAAAAGGGGGGAPGAAAGGAGPGGAAAAAVGLALCRRKDGGPAGKFWESPETVSQLDSVR
VWLGKHYKKYVQADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGG
TLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPNIYLIPDI
ELKLANKLKDIVKRHQGTFTDEKSKASHHIYPNPTSLEDEDWLRPVMKKDKQVLVHWGFY
PDSYDTWVHASDVDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDENKKPVSF
RQRISTKNEEPVRSPERRDRKAAASTRKRKHSPSPPPPTPAESRKKTGKKGQASLYGKRR
GQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETV
TTGGKEDEDPSKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFN
GKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVN
YQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRTPQVPAAQQMLNFPEKNKEKPTDL
QNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDE
CILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAK
AALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLDGT
EEEKMETESDGQQAEKVENKGENEIDETDKTQDGENDKSIEKEQDSEVNEDTKSEEKDGE
ENKENDTCKERENDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQ
MEQQQHGQNAQQSHQHSGGPGMNPIGAPGHPGMLPHQQPPPYPMMHHQMPPPHPPQPGQM
PGPGSMMPGQPMPGRMIPAVAANIHPSGGGPPPPVMPPMPGNIIGPRVPLAAPNGMYPPP
PQQQPPPPPPTDGVTPPPAAAPASSAP
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggtgggggcggcggcgccccgggggcggcggcgggcggtgcg
gggccagggggcgcggcggcggcggccgtgggcctggcgctgtgtaggcggaaggacggg
ggcccggcgggcaagttttgggagagcccggagacggtttcccagttggactcagtgcgg
gtctggctgggtaagcactacaagaagtatgttcaagcagatgctcctacgaataaaact
ttggctgggctagtagtacagcttctgcagtttcaagaagatgcctttgggaaacatgtc
accaatcctgccttcactaagcttcctgcaaagtgcttcatggatttcaaagctgggggt
accttgtgtcacattctcggggctgcttacaagtataaaaacgaacagggctggagaaga
tttgacctgcagaatccttcccgaatggatcgtaacgtggagatgtttatgaacattgaa
aagacactagttcagaacaactgtctgagcagacctaacatctacctcattccagacatt
gaactgaagttggctaacaaactaaaggacattgtcaaacgacatcagggaacattcact
gatgaaaaatcaaaagcctctcatcacatttatcctaatcctacttcgctggaggatgaa
gattggttgagacctgtgatgaaaaaagacaagcaggtgctagtgcactggggattttac
ccagacagctatgatacttgggtccatgctagtgatgtcgatgctgaaattgaggatcct
cccattccagaaaaaccatggaaagtccatgcaaaatggattttagacaccgatattttc
aatgaatggatgaatgaagaagattatgaggtggatgagaacaagaaaccagttagtttt
cgtcagcgcatctcaacaaagaatgaagagccagtccgtagtcctgagagaagagatagg
aaagcagcagcaagtacaagaaagagaaaacattcaccttctcctccacctcctactcct
gctgaatcaagaaaaaagactggaaagaaaggacaagctagtctttatggcaagagacga
ggtcagaaagaagaggatgaacaggaagatcttactaaggatatggaagacccaacacct
gtacctaacatagaagaagtggtacttcctaaaaatgtgaacccaaagaaagatagtgaa
aatacaccagttaaaggaggaacagtagcagatctagatgaacaggatgaagagacagtg
acaacaggaggaaaggaagatgaagatcccagcaaaggagatcagagtcgatcaattgat
cctggtgaagataatgtaacagagcaaacaaatcatattattatccctagctatgcttca
tggtttgattataattgtattcatgtgatagaacgtcgtgctcttcctgagtttttcaat
gggaaaaacaagtctaaaactccagaaatatacttggcataccgtaatttcatgattgac
acataccgcttaaaccctcaagagtatttgaccagcactgcttgcaggcggaatttgaca
ggagatgtctgtgctgttatgagggttcatgcttttttagaacagtgggggctcgttaat
taccaagttgatccagaaagtcgaccaatggcaatgggacctcctccaactcctcacttc
aatgtccttgctgataccccttctgggctagtgcctcttcatctcagaacacctcaggtc
cctgctgctcagcagatgctaaattttcctgagaaaaataaggagaagcctactgactta
cagaactttggtctccgcacagacatttactccaagaaaaccttagcaaaaagtaaagga
gccagtgctggaagagagtggactgaacaggaaacactcctgcttttagaggcccttgag
atgtacaaagatgattggaataaagtatcggaacatgttgggagtcgaactcaggatgag
tgcattctccacttcctgagacttcccattgaggacccttatcttgagaactcggatgcc
tccctgggacctctggcttatcagcctgttcctttcagtcagtccggaaacccggtgatg
agcacagttgcgttcttggcatctgttgtagatccgcgggtagcgtctgcagcagccaaa
gctgccttagaggagttttctcgggtccgggaagaagtacctttggaattagttgaagct
catgtcaagaaagttcaggaagcagcaagagcctctggaaaagtagatccaacatatggt
ctagagagtagctgtattgctgggactggtcctgatgaaccagagaaacttgatggtact
gaagaagaaaaaatggaaacagagtcagatggacaacaggctgaaaaggttgaaaacaaa
ggagaaaatgaaattgatgaaactgataaaacacaggatggagaaaatgataagagtatt
gagaaagaacaagatagtgaagttaatgaggataccaaatcagaagagaaggatggtgaa
gagaataaggaaaatgatacctgtaaagagagagagaatgatactggaaagaagaaagtg
gagcatgagatttctgaaggaaatgtagccacagcggcagcagctgctcttgcctcagct
gctaccaaagcaaagcacctagctgctgtagaagaaagaaagatcaaatctctggtagcc
ctgctggtagagacacaaatgaagaaattggagattaaactccgtcattttgaggaactg
gaaacgatcatggacagggagaaggaggctttagaacagcagagacagcagttactcact
gaacgccagaacttccacatggagcagctaaaatatgctgaattaagggctcgccagcaa
atggagcaacagcagcatgggcagaacgctcagcagtcccaccagcattctggaggacct
ggtatgaacccaattggagcaccagggcatccaggaatgttgcctcatcagcagccccct
ccttatcccatgatgcaccatcagatgccccctcctcatccccctcaaccaggtcagatg
cctggtcctggttccatgatgcctggacagcccatgccaggccgtatgattccagctgtt
gcagccaatatccatccttctgggggtggtcctcccccacctgtcatgccaccaatgcct
gggaacatcattggaccacgagtaccccttgcagcacccaatggcatgtatccccctcct
ccacagcaacagcccccaccacctcctcctaccgatggcgtcactcctcctcctgcagca
gcaccagcctcctcggctccctaa
DBGET
integrated database retrieval system
