Petaurus breviceps papuanus (sugar glider): 138167529
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Entry
138167529 CDS
T10505
Symbol
MTREX
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03018
RNA degradation
Brite
Enzymes [BR:
pbrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138167529 (MTREX)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
138167529 (MTREX)
Spliceosome [BR:
pbrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138167529 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
138167529 (MTREX)
Ribosome biogenesis [BR:
pbrv03009
]
Eukaryotic type
Pre-60S particles
Helicases
138167529 (MTREX)
Transfer RNA biogenesis [BR:
pbrv03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
138167529 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138167529
NCBI-ProteinID:
XP_068952609
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MADAFGDELFSVFEDESPATGIKKGKGVAEAAGKAKKRTDDKTQSGSTNVGKNKRDLELE
GTDEPIFGKKPRIENTFAEDVSLADLMPRVKVEAVETVEGCTHEVALPADEEYVPLKPRD
GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS
PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV
IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT
DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGTK
GPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTAEEKKMVEEVFNNAID
CLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGI
NMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDERGIVILMVDEKMSPTVGK
QLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKKLE
AQYNAIAIPNEESVVIYYKIRQQLAKLAKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDF
GWGVVVNFSKKSNVKPNSGELDPLYVVEVLLHCSKESLKNSATEAAKPAKPGEKGEMQVV
PVLVHLLSAISSVRLYIPRDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQG
LKKVIQKVEAFEHRMYSHPLHNDSNLETVYKLCERKAQIAVDIKSAKRELKKARTVLQMD
ELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALL
SCFVFQENSTELPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLNTFKSNLMDV
VYTWATGCTFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITK
IKRDIVFAASLYL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgttcggggacgagctcttcagcgtgtttgaagacgaatcgccggccacc
gggattaagaaaggaaaaggggtggcagaggccgctggcaaggccaaaaaacggacagat
gataaaacacagtcaggatctaccaatgttggaaagaacaaaagagatttagaattggaa
ggtacagatgaacccatatttggaaagaagcccagaatagaaaatacattcgcagaagat
gtaagtctggcagatctcatgcccagagtcaaggtggaagcagtggaaactgttgaaggc
tgtacacatgaggttgcattacctgcagatgaagaatatgttccactaaagccacgagat
ggaaaagctgccaaggaatatccattcattcttgatgcctttcagagagaagccattcag
tgtgtagataacaaccagtctgttttagtgtctgcacatacatcagctggaaaaactgta
tgtgctgagtatgccattgctttggctttgagagaaaagcaacgtgtgatatttaccagc
ccaattaaggctttaagtaatcagaaatatcgtgaaatgtatgaagaatttcaagatgtt
ggcctgatgactggtgatgtcaccataaatcctaccgcttcttgcctggttatgactact
gagattttgagaagtatgttataccgagggtctgaggttatgcgagaagttgcttgggtc
atatttgatgaaattcattatatgagagattcagagcgtggtgtggtatgggaagaaact
attattttgcttcctgataatgttcactacgtcttcctttctgctactattccaaacgct
cgacagtttgcagaatggatttgtcatttacataaacagccttgccatgtaatttacaca
gattatcgaccaactccattgcaacattatatctttccagcagggggagatggccttcat
cttgttgtcgatgaaaatggtgatttcagagaagataattttaatactgcaatgcaagtg
cttagagatgcaggagatttggcaaaaggagatcagaaggggaggaaaggaggaacgaaa
ggaccatcaaatgtgttcaaaattgtgaagatgataatggaaagaaattttcagcctgtc
atcatttttagtttcagtaaaaaagactgcgaagcgtatgccctccagatgaccaaatta
gatttcaacacagctgaagaaaagaagatggttgaagaagtatttaataatgcaattgac
tgcttatctgatgaggataaaaagcttcctcaggttgagcatgtgcttcctcttttgaag
agaggaattggtattcatcatggtggcttgcttcctattttgaaagagaccatagaaatt
ctcttttcagaaggattgataaaggccttatttgcaacagaaacttttgctatgggaatt
aacatgccggccaggactgtgttgtttacaaacgcccgtaaatttgatgggaaagatttt
cgatggatttcttctggtgaatatattcagatgtctggtcgagctggaagaagaggtatg
gatgagagaggaatcgtcattctcatggtggatgagaagatgagtccaactgtaggaaaa
cagctactaaagggctcagctgatcctctcaatagtgcttttcacttgacctacaacatg
gttctgaatttgctgcgtgtagaagaaattaaccctgagtatatgttggaaaaatctttt
tatcaatttcagcattatagagctattccaggagtagtagagaaggtaaagaaactagag
gcacagtataatgcaatagcaattcctaatgaagaaagtgtagtcatctactacaaaata
aggcaacagcttgccaagctggctaaagagattgaagaatatatccacaaaccaaagtac
tgtttgccatttttgcagccaggacgattggtaaaggtgaagaatgaaggggatgatttt
ggttggggagtagtggtgaatttctccaagaaatcgaatgttaagcccaattctggtgaa
ttagatcctttatatgttgtggaagtacttttacattgtagcaaagagagcttgaaaaat
tctgccaccgaggctgctaaaccagcaaaacctggtgaaaaaggagagatgcaggtggtt
ccagtcctggtgcaccttctgtctgctatcagcagtgttcggctttatattcccagagat
ctgaggccagtagacaaccgacagagcgtgctaaaatcaatacaggaagttcagaaacgt
tttcctgatggtgttccgttactagatcccattgatgatatgggcatacaagatcaagga
cttaaaaaagtcatccagaaagtagaggcttttgaacatcgaatgtattctcatccactt
cataatgattcaaatttggaaactgtttataagctttgtgaaagaaaagcacagattgct
gtagatattaaatctgcaaagcgagaactaaagaaagcaagaactgtcttacaaatggat
gagctcaagtgtcggaaacgtgttttacgaaggctgggttttgctacatcttctgatgtc
atcgagatgaaaggacgagtggcatgtgagatcagcagtgccgatgagctgcttttaact
gaaatgatgtttaatggacttttcaatgacttgtctgcagagcaagctactgcattgcta
agctgttttgtatttcaggagaattccactgaactgcccaaattgacagaacagctagca
ggaccacttcgccaaatgcaggaatgtgctaaaaggattgcaaaagtttcagcagaggcc
aaattagaaattgacgaagagacgtatctaaacacattcaagtcaaacttaatggatgta
gtgtatacctgggcaactggatgtacatttgcccacatctgcaaaatgactgatgtcttt
gaaggcagcataatccgttgtatgaggcgtctggaagaattgcttcggcagatgtgtcaa
gctgcaaaagctattggaaacactgaactggagaataaatttgcagaaggaatcaccaaa
atcaagagagatattgtgtttgctgcaagcctttacctgtaa
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