Petaurus breviceps papuanus (sugar glider): 138173774
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Entry
138173774 CDS
T10505
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03440
Homologous recombination
pbrv03450
Non-homologous end-joining
pbrv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138173774 (RAD50)
03450 Non-homologous end-joining
138173774 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
138173774 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbrv03032
]
138173774 (RAD50)
03400 DNA repair and recombination proteins [BR:
pbrv03400
]
138173774 (RAD50)
DNA replication proteins [BR:
pbrv03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
138173774 (RAD50)
DNA repair and recombination proteins [BR:
pbrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
138173774 (RAD50)
BRCA1-C complex
138173774 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
138173774 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
AAA_16
MafB
AAA_13
Motif
Other DBs
NCBI-GeneID:
138173774
NCBI-ProteinID:
XP_068959960
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSIMGVRSFGIEDKDKQVISFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNTFVYDPKIAQETDVKAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRSVRHNQSIRVKECQTELKYLKQNKEKACEIRDQIVSKEAQLASSKEF
VKSYDNELGPLKTHLKEIEQNLSKIMRLDNDIKALDSRKKQMEKDNNELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLNDCQRELDRTDKESKLLNHEKSELLVEQGRLQLQADHH
QQNIRTRDSLIQSLATHLELDGYERAPFNERQIKNFQKLVKDIEERETEANRRMMNDFAG
KENMKQKQIDEIRDKKTGLERILELKLEIQNKKQTELKNVKYELQELEGSSDRILELDQE
LGKTELELGKAEENSNIAALKEEVPALLREKGDLDRSLRKLDQEMEQLNLHTTTRTQMEM
LTRDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLVKFNKE
LASAEQNKNHINNELKQKEEQLSKYEDKLFDVCGSQDFESDLDKLMDEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RREKRRDEMMGLKPIRQNIIDLKEREIPELRNKLQNVNRDIQHLKGEIEEQETLLGTIMP
EEESAKACLTDVTIMERLQMELRDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHRLD
TVSSKIELNRKLIQDQQERIQHLKSTVNELKSEKLQISSNLQRRQQLEEQTVELSTEVQS
LHREIKDSKEQLCPLEATLVKLQQEKEELINKKNTSNSAVQEKLNDIKEKVKNISSCMKD
IENYIQDGKDSYKMQKEAELDKVISQLNECEKQKDKISKERETMRQDIDMQKVQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQLKNEYQTLEEKIETLKRNHSLALGRQKG
YEEEILHFKRELREPQFSDAEEKYREMMIVMRTTELVNKDLDIYYKALDHAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDTDENVSASDKRRNYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIRKNIDQCSEIIKCSISSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattgaaaagatgagcattatgggtgtgaggagttttggaatagaggacaag
gataagcaagttatcagtttcttcagtcctttaacaattttggttggacccaatggtgca
ggcaagacgactattattgaatgtctgaagtatatttctactggagatttccctcctggt
accaaaggaaatacatttgtctatgatccaaagattgctcaagaaacagatgttaaagct
cagattcgtctacagtttcgggatgtaaatggggaacttgtagctgtacagaggtcaatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaacgctagaaggagtcattactaga
acaaagcatggtgaaaaggtgagcctcagctctaagtgtgcagaaattgaccgagagatg
atcagttcccttggtgtttccaaatctgtgctcaataatgtcattttttgccatcaagaa
gattccaattggcctttaagtgaagggaaggccctgaaacagaaatttgatgaaatcttt
tcagcaacaaggtatattaaagccttggagacacttcgttcagtgcgtcacaaccaaagt
attcgggtaaaagaatgtcagactgaactaaagtacctgaaacagaataaggaaaaagct
tgtgagattcgagatcagattgtcagcaaggaagctcaattagcatcttctaaggaattt
gttaagtcctatgacaatgagcttggaccactgaagactcatctaaaggaaatagaacag
aatctttctaaaataatgaggcttgacaatgacattaaagctctggatagtagaaagaag
caaatggaaaaggacaacaatgaactagagcagaaaatggagaaggtatttcaagggact
gatgaacagctaaatgatttgtaccataatcaccagagaacagtgagagaaaaggaaagg
agactgaacgactgtcagcgagagctggacagaactgataaagagtctaagctgctgaat
catgaaaaatcagaattgcttgtggaacagggtcgtctacaattacaagcagatcaccat
caacagaacatccgaactagagattcattaatacagtctttggcaacacatttagaatta
gatggttatgagcgagcaccatttaatgaaaggcaaattaaaaattttcagaagcttgtg
aaggacatagaagaaagagaaacagaagctaataggcgaatgatgaatgactttgcagga
aaagaaaatatgaaacaaaaacagatagatgaaataagggataagaaaactggcctggaa
cgaatacttgaactgaaattagaaattcaaaataagaaacagactgagctgaaaaatgta
aaatatgaactgcaagagctagagggatcttcagacagaattctggaactggaccaagaa
cttggaaaaaccgaacttgaacttggaaaggcagaggaaaacagtaacatagcagcgctg
aaagaagaagtaccagcactgctacgggaaaaaggcgacctagacagaagccttcgtaaa
ttagaccaggagatggaacaattaaacctccacactacaacgagaacccaaatggaaatg
ttgaccagagacaaagctgacaaagatgaacaaataagaaaaataaaatctagacacagt
gatgaattaacttcattgttaggctattttcccaacaaaaaacaacttgaagactggctt
catagtaaatctaaagaaattaatcagacaagagacagacttgtcaaatttaataaagaa
ctagcttcggcagaacaaaataaaaatcacatcaacaatgaactgaagcagaaggaagaa
cagttgtccaaatatgaagacaaattatttgatgtttgtgggagtcaagattttgaaagt
gatttggacaaactaatggatgaaattgaaaaatcttctaaacaacgagcaatgcttgct
ggagccaccgcagtttactctcagtttattactcagctaactgatgaaaaccagtcgtgt
tgccctgtatgtcaaagagtctttcagacagaggctgaactacaagatgtgataagtgat
ttgcaatccaaacttcgccttgctccagacaaactcaagtcgacagaatctgagctgaag
agaagggaaaaaaggcgtgatgaaatgatggggcttaaaccaataagacaaaacataatt
gatttgaaggaaagagaaataccagaattgaggaataaactacagaatgtgaacagggat
atacagcatctaaagggtgaaatagaagaacaagagactctcttaggtactataatgcct
gaagaggaaagtgctaaagcatgtttaacagatgttactatcatggaaaggttacagatg
gaacttagagatgttgaacgaaaaattgcacaacaagctgctaagctacaaggcgtagat
ttggatcgaactgttcaacaagtaaaccaagaaaagcaagaaaaacagcatagattggac
acagtttccagtaaaattgagttgaatcgtaagcttatacaagaccagcaagaaagaatc
caacacctaaaaagtacagtaaatgaacttaaatcagaaaaacttcagatatctagtaat
ctgcaacgtcgacagcagctggaggaacagacagtagaattgtctacagaagtgcagtct
ttacatcgagaaataaaagattcaaaagagcagctgtgtcctttggaagccactctggta
aaattgcagcaagaaaaagaagaattaattaacaaaaagaatacaagtaacagtgcagta
caggaaaaattaaatgatatcaaagagaaggttaaaaatatctctagttgtatgaaagac
attgagaactatattcaagatggaaaagacagctacaaaatgcaaaaagaagctgagctc
gataaagtaataagtcaattaaatgaatgtgaaaaacaaaaagacaagataagtaaggaa
agggagacaatgagacaagacattgatatgcaaaaggtgcaggaaaggtggctacaagat
aaccttaccctgaggaagagaaatgaggaactgaaagaggttgaagaagaaagaaagcag
cacttaaaggagatgggacaaatgcaggttttacagctgaaaaatgaatatcagacatta
gaagaaaaaatagaaacattgaaaagaaatcacagtttagcattaggacgacaaaaaggc
tatgaggaagaaattcttcattttaagagagaactgcgggaaccacagttttctgatgct
gaggaaaagtacagagaaatgatgattgtgatgagaacaacagaacttgtgaacaaggac
ctcgacatttattacaaggcattggaccatgcaataatgaagtttcatagcatgaaaatg
gaagaaatcaataaaattattcgtgatctctggcgaagtacctaccgaggccaagatatt
gaatatatagaaattcgatctgatacagatgaaaatgtgtcagcttctgacaaaaggagg
aattacaactatagagtagtaatgataaaaggagatacagccttggatatgcgaggacga
tgcagtgccgggcaaaaggtgcttgcttcccttatcattcgcttggccctcgcagagacc
ttctgtttgaactgtggcattctggccttggatgagcccacgacgaaccttgatagagaa
aacattgaatctcttgcacatgccctggtggaaataataaaaagtcgttcccaacagcgc
aacttccagcttcttgtgatcacccatgatgaagactttgtggagcttttgggtcgttct
gagtatgtggagaaattctacaggattagaaagaacattgaccagtgctcagagatcatc
aaatgtagcatcagctccctgggctcttacgttcattga
DBGET
integrated database retrieval system
