Petaurus breviceps papuanus (sugar glider): 138175191
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Entry
138175191 CDS
T10505
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbrv04131
]
138175191 (VPS13A)
Membrane trafficking [BR:
pbrv04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138175191 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
138175191
NCBI-ProteinID:
XP_068961722
LinkDB
All DBs
Position
Unknown
AA seq
3163 aa
AA seq
DB search
MVFESVVVDVLNRILGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALGELDVPFKVKAG
HIGKLDLVIPWTNLYTQPVEAVLDGIYLLVVPSTTLKYDAEKEEKYLLDMKQNELKRIED
AKQKMANKEHPQQEKQDTFTEKLIAQIIKNLQLKISNIHVRYEDDVTNRKKPLSCGISLQ
NFSMETTDQDWKPSVHDAAKNVFCKLICLDNLFGYWNVKSKMFHKYGDRKTSLENLKYGI
VHKDIVPEGYDFVFRPISAQAKLRMNHRADLDFSTPKMDLDVTLQDIGIELNKLQYFSIM
ELLESVDLMTQNLPYRKYRPDVLVHNNAKKWWKYAITGILKVNIQPRLQMWSWKYICEHR
RNIKQYKELYKRKIRSKKPADEILSSLQHLEKVLDVFNIILARQQAEVEIRKAGLKIYGA
SPEENKGWFGWMWNWSESSSPEQADVKPASFEEYMTSEEKTKLYEAIGYSETIVDPTLPK
TYEAKKLCLRLESMHISLRENQKKPELVLISLGELSILIIQRPGAQAIKFESKIDSFRIT
GSSGYDSKPCLLSSLDDCSSLFTIMFETNPLDECAAQRCVVEAEPLEIIYDAKTVNSIVE
FFRPPKEVRLAQLTTATLMKLEEFREKTSTGLLYIIETQKILDLKINVKASYIIIPQNGF
YTAASNILLLDLGHLKVLSQNRSELPHIEISQTSIEEIMSRAYENFDIQLSSIQLLFSTS
GDDWREARKLRRSHQHILEPLHFNVELSKSMVVTDIRMPKFKVFGHLPLLSLQVSDQKLG
GILELIKSIPRPQSGTDVSALPRSSVARSSSSFGTPQLSQKLLPLLELQSIIEDESEEEF
FDAPCSPLEEAPCVPIARQRRTQKQEPTNLIDFTMKFEIPKVLIQCYRLIENLEQPVVEL
DILGLGTEIQLRRFDMRASAYLKEICLKCPEYQDEKGKPVYIVTTLDNTVEDLLMLEYVK
ADKHGPDLKTVYENVIQLLKVNFSSLDIHLHTEALLSIMNFINNLLPGREVKSSSEIQIV
ETEEKGEIIKKLSSRIFRTEDIITLKFIAELSSLCIFIEDQRYRIAEITIEGFDSQVIMR
HTITEVNVNLKNIIILDSDETALYKKVLYITGKEVFSFKMVSYLGATAGAEYMNMNVVDS
AVTLTVGCIDVVVIMKFLYSVMAFINNFQRAKEALTEATVQATGIAGGVKELAKRSSRMA
LDIHIKAPVVVIPQSSESENVIVADFGLITMKNKFYMVSKSNFNLPPVIDDITVKLSEMK
LYRSQFVEGQFPEVLDIMQPLNLEVNVQRNLSWEWYQEIPAINLDAQLKPMELILSQEDL
TMIFKMLYENIWIEDTNPVTEVMEESSVAGDPTTHRFSGGTTLVTAAVVEMHSHAPRINT
TLNLNFRTDYMTLTLYSADPKNTSFVDVRDPLLKLAEFKLEQILSVAKMFTDDSLFSSLS
LKHCILEDKQSHIRKATPQMIGLTVGFERKDMMDVRYKRNKDGVVIDVILQELYLCASIQ
FLRAVADVFLTAYYSGIVIETTPVQQMSSKVQLDIEEKWEMNVLIKNPEIVFVADLSRHD
APSLVLTTQCEICWKWTPLTETITAAIKDLQMKACPFLPGMREGKVTTVLQPCDLFYQSV
QSGTDPQMVDISVKALTLKISPIIINTIITIMASFYKTVEVKHQESFPSQPDLWDKMDTK
KLKMWFLEESSDNENVATVTELVPNGEMIKMTIDSIFVVLEAGVGHRTVPMLLAKSYFSG
EGKNWSTLINLHCQLELEVHYYNEVFGVWEPLLEPLEIDQTEDFRPWNLGVKIKKKARKA
LVELETEEENYKVPEYKTVISFYSKDQLNITLSKCGLVMLNNLGKAFAEAAVQTSDVFTK
DQAPFMIFNSLGITISVSMSDSFRVLNVPEAKAFELKNEQSLSMDYVRSHDGDQFSAMTS
LSSKLFFILLTPENHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTIEGSKKVTVR
SPVQMRNHFLVPLHIYEGDTLLGTALPENEFNVPLTSYRSVLFLKPDGEEYAPCDPINFE
EIIKHEGLLLEKRCRALYSDKKAFIINIVPEQDKLTSMSAYSDDGWDLPYIIHLWPPVLL
RNFLPYKIAYYLEGNELRVFTLTEGCSTQIYTAELDNIRLHLKLIDYLDQDWKSEYQIRS
NQHDISFISFICVTEIEKTELVIAIHLTYTTGQAIVAFHSPYWMVNKTGRMLQYKADGIH
RKHPPDYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIKCKGMTMDYQ
VGVTIDLSSFNLTRIVTFTPFYILNNKSRYNVKVSEEGNEKWISLDLEECIPFWPETASD
KLLIQVENSEDPPKKIHLNKQENCILLNLGNKLGGIIVQVNIAEHSIIITFMDYHDGSAT
FLLINHTKDEIVEYKQSCLTEMEDMLPPGKAVLYTWSDPIGSRKLTWKCGKSRGEVTQKD
DMMTPINLGGKKTIYLVSFFEGLQRIILFTEDPKVFKVTYESEKAELAEQEIVLSLQDVG
ISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWRPLSIKQTEKLEREFKEYIEISPSED
KIIQLEPNVSVYLTPSGSNMKILQPHMIPVRRNYLPAVKLEYSTSAHQTSFRIQIYRIQI
QNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQITRIKYFKVLIQEMD
LRLDLGFLYALADLMAEAEVTETHEVELFHKDVEYFEEGFQTDSLTDITQVSLYEYFHIS
PIKLHLSVSLSSGRDDGKDTTQQRGMIPVHSINLLLKSIGATLTDVQDVVFKLAFFELNY
QFHTTPQLQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAFFYEPYHGAI
QGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQKRREAMNKQ
PAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGG
IIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVIENGRFA
KNKYITHVMVNKTDFLMITSSGVLFVTEGTFGQLTCEWQYNFDEFTKEPFIVHGRRLRIE
AKERVKSVFHAREFGKIINFKTAEDAQWVLSKLEEVREISPRF
NT seq
9492 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaatcggattttgggggattatgtggtg
aacctggacacttcccagctgacgctgggcatctggggaggtgctgtagcccttaagaat
cttgaaattaaagaaaatgcattgggtgaactggatgtaccatttaaagtcaaagctgga
catataggtaaacttgatcttgtgattccatggacaaacctttacactcagccagttgag
gcagtattggatggaatttacttacttgtagtgccttcaaccactttgaaatatgatgca
gaaaaagaagaaaaatatctcttagatatgaaacagaatgaactaaagagaatagaagat
gcaaaacagaaaatggcaaataaagaacatccacaacaagagaaacaggatacttttaca
gaaaagctaatcgcacagataataaaaaatcttcagttaaaaatttctaatatccatgtc
cgatatgaagatgatgttacaaatcgaaaaaaaccattgtcttgtgggatatctcttcag
aatttcagcatggagacaactgatcaagattggaaacctagtgtacatgatgcagctaag
aatgtgttctgtaagctaatatgtttagataacctttttggctattggaatgtgaaatct
aagatgtttcacaaatatggtgatcgtaagacatctttggaaaatttaaagtatggaatt
gtccataaagacattgtcccagaaggttatgattttgtattccgtcccatatcagctcaa
gccaaactccgcatgaatcaccgcgcagatttagatttttctacaccaaaaatggatttg
gatgttacgctacaagatataggcattgaattgaataaattgcagtatttcagtatcatg
gaactccttgaatcagttgacctgatgactcaaaatctgccatataggaagtataggcct
gatgtacttgttcacaacaatgccaaaaaatggtggaagtatgcaataactggtattctt
aaagtaaatatccagcccaggctgcagatgtggtcatggaaatacatttgtgaacatagg
cgaaacatcaagcagtataaagagctttataagagaaagataagaagcaaaaagccagct
gatgaaattctaagctctttgcagcatttggaaaaggtcttggatgtatttaacatcatt
ttggcaagacaacaagcagaagttgagataaggaaagctggacttaaaatttatggagcg
tctcccgaggaaaataaaggctggtttggttggatgtggaattggtcagagtccagcagc
cctgagcaagcagatgtcaagcccgcgagttttgaagaatatatgacatctgaagagaag
actaaactctatgaagcaattggttatagtgaaaccattgttgacccaacgttgcccaaa
acatatgaagccaaaaaattatgtctacgcttggaaagcatgcatatttccttaagggaa
aaccagaaaaaacccgagttggtgcttatttccttaggagaactcagcatattgatcata
caacgaccgggagcacaagcaataaaatttgaaagcaaaatagactcatttcgtattact
ggttcatctggttatgactcaaaaccttgtctcctttcttcattggatgattgttcttca
ctcttcacaattatgtttgagaccaacccattagatgaatgtgctgctcagagatgtgtt
gtagaagctgagcctttggaaatcatatatgatgcaaaaacagtgaatagtatagtggaa
ttctttcgacccccaaaagaagttcgtttggcacagttaactacagcaactttgatgaaa
ctggaagaatttcgtgaaaagacatcaacaggtttattgtatattattgaaacgcagaaa
attcttgatctcaaaattaatgtgaaggcttcatacattattatcccacaaaatggattt
tatactgctgcatcaaatatacttctcttggatcttggtcatctaaaggtgttaagccag
aatcgttctgagttaccacacattgaaataagccagactagtattgaagagattatgtct
agagcttacgaaaattttgatattcaacttagtagcatacagctactatttagcacatct
ggtgatgattggagagaagctcgcaaactccggcgttctcatcagcatatcttggagccg
ctgcatttcaatgtggaattgtccaagtccatggttgtcacagatataagaatgcccaaa
ttcaaagtttttggacatctgcccctactttctttgcaagtttcagatcaaaaattagga
gggattttggaattaattaaaagcattccaaggccacaaagtggaactgatgtatctgcc
cttccaagaagttctgtggctcgttcatcatcttcttttggaacaccccagctttcacaa
aaactgcttcctctcttggaacttcaatccattattgaagatgaatctgaagaggaattt
tttgacgctccttgtagtccgctagaagaagctccctgtgtgccgattgctcgacaaaga
aggactcagaaacaagagcctacaaacttgattgattttacgatgaagtttgagatacct
aaggttttaattcaatgttaccgccttattgaaaatttggagcagcctgtggtggaacta
gatattctgggattaggcacagagattcaattaagaagatttgacatgcgagcaagtgct
tacttgaaggaaatttgtttaaaatgtccggagtaccaagatgaaaagggtaaaccagta
tacattgtcacaacactggataatacagtagaagatctgctaatgctggaatatgttaag
gctgataaacacggaccagaccttaaaactgtctatgagaatgttatacagctgttaaag
gtaaatttttcctctttggatattcatttgcatactgaagcacttttgagtattatgaat
tttataaataatctccttcctggaagagaggtaaaatcatcctcagaaattcaaattgtg
gaaactgaagaaaaaggagaaataattaagaaattatcttccaggatttttaggactgaa
gatatcattacccttaagttcattgctgaactgtcttccttatgtatctttattgaagac
caaagatatagaattgctgaaattacaattgaagggtttgattcccaggtgataatgaga
cacaccataactgaagtaaatgtaaacctgaaaaatataattattttagattctgatgaa
acggccttatataagaaggttctttatataactggaaaagaagtcttcagtttcaaaatg
gtttcttatttgggtgctactgctggtgctgaatatatgaatatgaatgtagttgacagt
gcggttactttaactgttggctgcatcgatgttgttgtaataatgaaatttttatattct
gtaatggcttttataaacaactttcaaagagcaaaagaagctttgactgaagcaacagtt
caagcaacaggtatagctggtggtgtaaaagaactggcaaaaaggagttcccgaatggcc
ttggatattcatatcaaagcacccgttgtagtaatcccacagtcgtccgaatctgaaaac
gtcatcgttgctgattttgggctaataacaatgaagaacaagttctacatggtgtccaag
agcaactttaaccttccacctgtcatcgacgatatcacagtgaagttgagtgaaatgaaa
ctctacaggtctcagtttgttgaaggccaatttcctgaagtactagatataatgcaacca
ttaaatcttgaagttaatgttcagcgaaatttatcctgggaatggtaccaagaaattcct
gctataaaccttgatgctcagcttaaaccgatggagcttattctaagtcaagaagacttg
actatgatatttaaaatgttatatgaaaatatatggattgaagatactaatccagtaact
gaagtcatggaagaatctagtgttgctggtgatccaacaactcatcgtttttctggagga
acaactttagtgacagctgcagtggtggaaatgcattcacatgcaccacgtattaatact
acattaaacttgaattttagaactgactatatgactttaactctgtacagcgcagatcct
aaaaatacttccttcgtagatgttcgggatcctcttttgaaacttgcagagtttaaattg
gaacaaattttaagtgttgcaaaaatgtttaccgatgactcattgttttcttcattgtcc
ttgaaacactgtatattagaagataaacagagccatatccggaaggcaactccacaaatg
attggacttacagttggctttgaaagaaaggatatgatggatgtaagatacaaacgaaat
aaagatggtgttgtaattgatgtaattttacaagagttatatctctgtgcaagtatacaa
ttcctgagagcagttgcagatgtctttcttacagcctattacagtggtattgttatagag
actactcctgttcaacagatgtcctcaaaagtgcaattagatatagaagagaaatgggaa
atgaatgttttgattaaaaatcctgaaattgtgtttgtggctgatttgtcaagacacgat
gctccatcattagtacttacaacacagtgtgaaatttgttggaagtggacacctcttaca
gaaacaataactgctgcaattaaagatctccaaatgaaagcttgtccatttcttccagga
atgagagaaggcaaagttactacggttttgcagccatgtgacctgttttatcaaagtgtc
cagtcgggtacagatccacagatggttgacatatcagtaaaagccctgacactcaagatt
tcacctattattataaataccattatcactataatggcatcgttttataaaactgtagaa
gttaagcatcaagaatcatttccctctcagccagatttatgggacaaaatggatacaaag
aagctgaaaatgtggtttcttgaagaatccagtgataatgaaaatgtcgctactgtgaca
gagttggttcccaatggagagatgataaaaatgactattgactcaatttttgtagttctt
gaagccggggttggtcacagaacagtacctatgctcttggctaagtcatatttttcaggg
gaaggcaaaaactggagtactttgataaatcttcactgtcaacttgagttagaagtacat
tactacaatgaagtgtttggtgtatgggaacctttacttgaacctttagaaattgatcaa
actgaagattttagaccatggaatcttggagtaaaaattaaaaagaaagcaaggaaggcc
ttggttgaattggagactgaggaagaaaactacaaagtgccagagtacaaaacagtaatc
agcttctattcaaaagatcaattgaatattacattatctaaatgtggccttgtaatgttg
aataatttaggaaaggcatttgcagaagctgctgttcaaacttcagatgtcttcacaaag
gatcaagcaccatttatgattttcaattcccttggaattactatctctgtgtcaatgagt
gattcttttcgtgttcttaatgttcctgaggcaaaagcatttgaattaaaaaatgaacag
agtttaagtatggattatgtcagaagtcatgatggtgatcagtttagtgcaatgaccagc
ctaagcagcaaactttttttcattctgctcacacctgaaaaccattctactgctgataag
attcctttgacaaaagttggtcgacgtctgtatactgttagacacagagagtctggtgtt
gaacgatctattgtttgtcaaattgatacaattgaaggaagtaagaaggttacagttcga
tctccagtgcagatgcgaaatcatttcttagttccattgcacatttatgaaggtgacaca
ttgttgggaactgctttaccagaaaatgagttcaacgtgccattgacatcctatcgatca
gtcctttttttgaaaccagatggtgaagaatatgcaccatgtgacccaatcaactttgaa
gaaattataaaacatgagggactcctcctggaaaagagatgtagagctttatactctgat
aagaaagcatttatcattaatattgtacctgaacaagataaattgacatcaatgtcagca
tattcagatgatggatgggatttaccatacataattcatctatggcctcctgttcttctt
cgcaattttcttccttacaaaattgcttattatctagagggaaatgaacttagagttttc
actttaacagagggttgttcaacacagatttacactgcagagctggataacattagacta
catttaaagttaattgactatcttgaccaagattggaaaagtgaatatcaaataagatct
aatcaacatgacattagttttattagtttcatttgtgtcactgagatagaaaagacagaa
ttagttattgccattcatttgacttacactactggccaggcaattgtagcatttcacagc
ccttattggatggtgaataaaactggtcggatgctacagtacaaagcagatgggattcat
cgaaagcatcctcctgattacaaaaagccagttctcttttctttccagcctaaacacttt
tttaataataacaaggttcagcttatggtgactgacagtgaattatcagaccagttttca
attgatactgtaggtagtcatggagctattaaatgtaaaggcatgacaatggactatcaa
gttggtgtgaccatagacttgagtagttttaaccttacaagaattgtgacatttactcct
ttttacatattaaataataaaagtagatataatgtcaaagtatcagaagagggaaatgaa
aagtggatttcccttgatttggaggagtgtatccccttttggcctgaaacagcttctgat
aagctgctgattcaagttgaaaacagcgaagatcctccaaagaagatacatttgaacaaa
caagaaaattgtattttgttgaacctaggcaacaaacttggaggaattatagtacaagtt
aacatcgctgaacattctataattattacatttatggattatcatgatggatctgctaca
ttccttctaataaatcacaccaaggatgagattgttgaatataaacaaagttgtctcact
gaaatggaagacatgcttcctcctggtaaagcagttttgtatacttggagtgatcccata
ggctctagaaaactgacctggaaatgtggaaagagccgcggtgaagtaacacaaaaagat
gacatgatgacaccaataaatttgggtgggaaaaagaccatttatttagtttcattcttt
gaaggcttgcaacgcattattttattcactgaagatcctaaagtatttaaagtgacgtat
gaaagtgaaaaagcagagttggcagagcaagaaattgtgttgtcattgcaagatgttggc
atttcgttggttaataactatacaaaacaagaagtagcctatattggcatcacaagctct
gatgtagtttgggagacaaaaccaaagaagaaggcaagatggaggccactgagtataaag
caaactgaaaaattagagagagaatttaaagaatacattgagatttcaccttcagaagat
aagattatacagctggaacctaatgtttcggtttatttaacacctagtggtagtaacatg
aaaattctacaaccacatatgatacctgtacgaagaaattacctgccagcagtaaaattg
gaatatagtacatctgcacatcagacatctttcagaatccaaatttataggatacagata
caaaatcagattcatggagctatatttccctttgtattttatcccattaaacctcccaaa
tcggtcaccatggattcagcaccaaagccatttacagatgtaagtattgtgatgagatct
gcaggacattcacaaataacacgtattaagtattttaaagtgttgatacaagaaatggac
ctcagattagatcttggatttctttatgctctggcagatctcatggcagaagctgaggtg
actgaaacacatgaggttgaacttttccataaggatgttgaatattttgaagaaggattt
cagacagactcattaacagatataacacaagtcagcttatatgaatattttcatatttct
cctatcaagttacacttgagtgtttcactgagctcgggtagagatgatggtaaagacaca
acacaacaaagaggaatgattccagttcattcaataaacctcttactgaagagtattggt
gccactcttacagatgtgcaagatgtagtatttaagctggcattttttgaacttaactat
cagttccatacaacaccccaactacagtctgaagtcataaggcattactcaaaacaggcc
attaagcaaatgtatgttcttattcttggacttgaagttttaggaaatccatttggctta
attcgagaattttctgaaggagtagaagcatttttctatgaaccatatcatggagccatc
cagggtcctgaagaatttgttgagggtatggcattaggacttaaagcactggttggagga
gctgttggtggactggcaggtgctgcctccaaaataactaatgctatggctaaaggtgta
gcagccatgactatggatgaagattaccagcagaagagaagagaagccatgaataaacaa
cctgcgggtcttagagaaggcatcacacgcggaggaaaaggcttagtttctggctttgta
agtggaataacaggaatagtgactaagccaatcaaaggagcccaaaaagaaggagcagca
ggtttctttaagggtgttgggaaaggcttagttggagcagtgacaaggccgacaggagga
attatcgatatggccagcagcacctttcagggaattaaaagagctactgagacttctgat
gaagtggagagtcttcgtcccccaagattctttaacgaagatggtgttattagaccttac
agattgagggatggaactggaaatcagatgttacaggtgatagaaaatggaagatttgcc
aaaaacaagtatattacacatgttatggtcaataaaacagatttcttgatgataaccagc
agtggtgtgttgtttgtgacagaaggaacatttgggcagctgacctgtgagtggcagtac
aattttgatgaatttaccaaagagccatttatcgttcatggaagaagattgcgtattgag
gccaaggaacgtgtgaagtctgtattccacgccagagagtttgggaaaataattaatttt
aagactgcagaagatgctcagtgggttctttcaaagctggaagaagtgagagagatttca
ccaagattctaa
DBGET
integrated database retrieval system
