Petaurus breviceps papuanus (sugar glider): 138175831
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Entry
138175831 CDS
T10505
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Brite
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138175831 (TNRC6A)
Chromosome and associated proteins [BR:
pbrv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138175831 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
138175831
NCBI-ProteinID:
XP_068962480
LinkDB
All DBs
Position
Unknown
AA seq
1911 aa
AA seq
DB search
MRELEAKATKEVERKLSRDLVKEEEEQLMEERKKRRDDKKKKEAAQKKATEQKNKVREQI
KPSVSQPQPASSTNGTSTATSTQNNARRAAASSQQQQQQALPRHPRGEVPPRFRHQEHKQ
LLKRGQRLPTIATNLGPASKVLNTQARGNSITNKQPVTNGEIQNKKKQPELNHSNLGSHY
ENSHWGPVSSNSDSSTNWDKVIVEGSDKEAWPSITDSDPELTSECMDTDSASSSGSEKNL
LIMASGSTSGENDGIRNGIGHSSQNKFVVGSNSNNVGNGSNSGPWSLSHGTIISTCQVSV
DAPDSKSESSNNRMNAWGTVSSSSNGGLNPSTLNSNSNHGAWPVLENNGHALKGPVGSGN
SGTNIQCSTIGQMPNNQSINSKMGGSTHDSWGNLQENCESEVNGTRKVSFSGQPQNLNTE
MNGPNNTTNFMTSSLPNAVGSVQMDELPNNTGHGAWRVSTRNHSQIQASSVTNGTSISHL
SNGESKNGGSYGTTWGAYGSNYSGEKCSGPNDQANGDTVNATLMQSGINGSVGTNFQMNG
NKGGSLWESEMVNSQNVPWGSGNGVNSGGNRRGWGSPAQNTGTNVSNGEWNKLPSNQHSN
ESMNGNSRKFTNGWKPTEEDDQSSAASQINEQNTIWAKTTGTGESEGSTESTGCREERVV
GEGQSRERRKVDQHALLQSIVNRTDLDPRVLSNKGWGETPIKQNTAWDTETSPRGERKTD
NGTEAWGRSLTQTSNSGSCVDKTNSNDTSSVSGWGDPKPATRWGDSKGSSSQGGWEDDSA
ATGMVKSNQLWGNGKEEKSTWNDAQKIKQGWGDGQKSNQGWSVSASDNWGETSRSNHWGE
AKKSSSGGSDSDRSVSGWNEPGKSNSFTWGNNNMNPNNSSSWDESAKSSQSQGWGEPPKS
NQPSGWGDSSKPINSPDWNKQDIGGSWGAPSSTNKPPGTGWLGGPIPAPTKEEEPTGWEE
PSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGGSRSDQQAQVHQPLPSSSAM
SSKESSSGSGWGEPWGEPSTPATTVDNGTSAWGKPMDTGTNWGEPITASSSSSTWGTTSV
GPQTSSKPGPKSMQDGWCGDDMPLTGNRPTSWEEEEDVEIGMWNSNASQEVNPSLNWPPY
IKKMSSKGTVKGGNKQDETWINPFVKQFSNLSFSRESPEETLPSNKMDLSGGMLQDKRMD
IDKHSLNIGDYNRVVGKGPGSRPQISKESSMDRSPYFDKNGNPSMFGVGNTAAQPRGMQQ
PPAQPLSSSQPHLRAQVPPPLLSPQVPVSLLKYAPNSGGLSPLFGPQQVAMLSQLSQLNQ
LSQISQLQRLLTQQQKVQNQRSMPSGGRQQQEQQGRSLSVQQQMMQQSRQLDPNLLMKQQ
TPPSQPQSSLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIGFYPISPVESPGLNS
NLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYEFL
NSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSV
INNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVSLSSTAQSTSARNS
DSKSTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKAPLSTWDNSPLRIGGG
WGNSDARYTPDPAHYPSATPAQDTHIDGLIRWAAGPGSSWGESSSGRITNWLVLKNLTPQ
IDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFA
SEEEISRFFAQGQSLTPSPGWQPLGSSQSRLGSIDSSHSFSNRNDLNHWNGAGLSGTSSG
DLHGTSLWGTPNYSTSLWGTPNSSDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagaagtcgaaaggaaactaagcagggattta
gtgaaagaagaggaagaacagttgatggaagaaaggaaaaagagaagggacgacaagaaa
aagaaggaagctgctcaaaagaaggccactgaacaaaaaaacaaagtgcgagaacagata
aagcccagtgtcagccagcctcagcctgccagctctactaacggcacttccacagcaacc
agcactcagaataatgccaggcgggccgcagccagcagtcagcagcagcagcagcaggcc
ctgcctcgccaccctcgtggtgaagtgccaccacgatttcggcaccaggaacataaacag
ctgctaaagagaggccagcggttgcctactatagcaacaaacctgggccctgcttctaaa
gtattaaatacccaggcaagaggcaacagtataacaaacaaacagccagtgactaatgga
gagatacagaacaaaaaaaaacaaccagaattgaaccatagtaatctaggatctcattat
gaaaattctcactggggaccagtgtcttctaatagtgactccagcacaaactgggacaaa
gttattgtagaaggctctgacaaagaagcatggccttctatcactgacagtgacccagag
ttgacttcagaatgtatggacactgactctgcctctagctctggatcagagaagaacctt
ttgataatggcttcagggagtacaagtggtgaaaatgatggaattcgaaatggcattgga
cacagttcccaaaacaaatttgtggtgggtagcaacagcaataatgtgggcaatggaagt
aatagtggaccatggagtctatctcatggaaccataataagcacatgtcaagtttctgtg
gatgcccctgacagcaaatctgaaagtagcaacaatagaatgaatgcttggggcaccgta
agttcttcatcaaatggagggttaaatccaagcactttgaattcaaatagcaaccatggt
gcctggcctgtattagagaacaatggacatgcccttaaagggcctgtagggagtggtaat
tctggcacaaatattcagtgcagtaccataggccagatgcctaacaatcagagtattaac
tctaaaatgggtggttccacccatgattcctggggaaatcttcaggaaaattgtgagtct
gaagtaaatggtacaaggaaggtttcattcagtggacaacctcagaaccttaacactgaa
atgaatggaccaaataacactactaactttatgacctctagtttaccaaacgctgttggt
tcagtgcagatggatgaactgcctaataatacagggcatggggcctggcgtgtgagcaca
aggaatcattctcagatacaggcctcttcggttacaaatggcacttccatttctcatctt
agcaatggtgagtccaaaaatggtggctcttatggtactacatggggtgcctatggttct
aattattccggagagaaatgttcaggccctaatgaccaagcaaatggtgacactgtgaat
gcaactctaatgcagtctggcataaatgggtctgttggcactaactttcaaatgaatggg
aataaaggaggaagcttatgggagtcagagatggtgaattcccagaatgtaccgtgggga
agtggaaatggtgtgaattctggaggaaatcgaagaggatggggaagccctgcacaaaac
actggcactaatgtatccaatggggaatggaataaactgcctagcaatcagcattccaat
gaaagtatgaatggaaatagtaggaagtttacaaatggatggaaacctactgaggaagat
gatcagagttctgctgcatctcagataaatgagcagaacaccatttgggccaaaacaaca
ggtactggggaaagtgaaggtagcacagaaagcactggatgccgtgaggaaagagtggtt
ggggaagggcagagtagagagagaagaaaagttgaccagcatgcattactccaaagcata
gtaaacagaactgacttagatccacgtgtcctctccaacaaaggttggggagagactcca
atcaaacagaatactgcctgggatactgaaacatcacctagaggtgaaagaaagactgac
aatgggacggaggcctggggacgctctttgacacaaacttctaactcggggagttgtgtt
gataagactaatagtaatgatacctcatctgtctctggatggggagatccaaagcctgct
acaaggtggggagattctaaaggctcaagcagccaagggggatgggaagatgattctgct
gctacaggaatggtcaagagcaatcagttgtggggaaatggcaaagaggagaaatctaca
tggaatgatgcacaaaagatcaaacaagggtggggagatgggcagaagtcaaaccagggg
tggtctgtttctgccagtgacaactggggagaaacttccagaagcaaccattggggtgag
gctaagaaatctagttcaggaggtagtgacagtgacaggtcagtatctggttggaatgaa
cctggtaaatcaaattcttttacctggggaaataacaatatgaatccaaataattcatct
agctgggatgaatctgcaaaatctagtcagtcccagggatggggagaacctccaaaatct
aatcagccttcaggttggggggattcttcaaagccaatcaactccccagactggaacaaa
caagatatcggtggatcttggggagcaccatcttccacaaataagccgcctggtacaggt
tggctcggtggaccaataccagctcctacaaaagaagaagaacctactggatgggaggag
ccatccccagaatcaatacgccgcaaaatggaaattgatgatggaacttctgcttgggga
gatccaagcaaatataactacaaaaatgtgaatatgtggaataaaaatgtcccaaatggt
ggcagccgttcagaccagcaagcacaggtacatcagccgctaccctcttcaagtgccatg
tcaagcaaggagagcagtagtggttctggttggggagaaccctggggagagccttctact
ccagccacaactgtagataatggaacttcagcatggggtaaacccatggacactggtact
aactggggggaacccattactgcttcatctagctcctccacctggggtacaacttctgtt
ggtccacagacttcgagcaaacctgggcctaaatctatgcaagatggttggtgtggagat
gatatgcctttgactggaaaccgacccacctcctgggaggaggaagaagatgtcgaaatt
ggaatgtggaatagtaatgcatcccaagaagttaacccatctttaaactggccaccatat
ataaagaaaatgtcctcaaagggaacagtgaaaggcggaaacaaacaagatgaaacctgg
ataaatccattcgttaagcagttctcaaatttaagtttttcgagagaatcaccagaagaa
actctaccgagcaataagatggacctatctggaggaatgttacaggacaaacgaatggac
attgataagcatagcctaaacattggcgattacaatcgagtagtagggaaaggccctggc
tctcgtcctcagatttccaaagagtcttccatggatcgcagtccttatttcgataagaat
ggcaatcccagtatgtttggtgttggtaacacagcagcacaaccccggggcatgcagcag
cctccagcacaacctctcagctcatctcagcctcatctccgtgctcaagtgcctcctcca
ttactctcccctcaggttccagtctcattactgaagtatgcaccaaacagcggtggcctg
agtccactctttggccctcaacaggtagccatgttgagccagctatcccagttaaaccag
ctttctcagatttcccagttacaacgattgttgacccagcagcaaaaggtgcagaatcag
agaagcatgccttctgggggtcgacagcagcaagagcagcagggtcgatctcttagtgtg
cagcagcagatgatgcaacagtctcgtcagcttgatccaaacctgttgatgaagcagcag
actccaccatcccagccacagtcgtcgctccatcagcctgccatgaaatctttccttgag
aatgtcatgccccacactacgcctgaactgcagaaagggccatcaccaataaatgctttc
agcaacttcccgataggcttttatccaatttccccagtggaaagtccaggcttgaactca
aacttgaatgtaaacatggatatgaacagtattaaagagccacagtcaagactgaggaaa
tggactacagtggacagcatttctgtgaacacatcattggatcaaaattccagcaaacat
ggtgctatttcaagtggttttaggctggaagagtctccgtttgttccgtatgaatttctg
aacagcagtaattcaccagccagtcctcctggttcaattggggatggctggccacgtgcc
aaatcgcctaatggctccagcagtgttaactggccaccagaatttcgccctggtgaacca
tggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtc
ataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaatagt
gggtcatcctcatctctgaacaccacgctgccttcaactagtgcctggtcatccattcgt
gcctccaactacaatgtttccctcagcagtacagcacaaagcacttcagccagaaacagt
gattccaaatcaacatggtctcctggttcagtcactaacacctctctggctcatgagctg
tggaaggtccctttgccacctaaaaacatcactgctccgtcccgcccaccaccgggatta
actggtcagaaggcccccttgtctacgtgggataattcccctcttcgtataggtggagga
tggggaaattctgatgccagatacaccccagacccagctcattatccatctgcaacgcct
gcccaagatacacatattgatggactaattcgatgggctgccggtccaggttcaagctgg
ggtgagagcagctcagggagaataacaaattggcttgttctaaaaaatcttacgcctcag
atcgacggctccaccctgcgtactctgtgcatgcagcatggtccactcataacattccat
ctgaacctcccacatggtaatgctttggtccgttacagttcaaaagaagaggtagtgaag
gcacaaaaatctctgcacatgtgtgtattggggaacactactattcttgctgagtttgcc
agcgaagaggagattagtcgtttctttgcacaaggccagtctctgacgccctctcctggc
tggcagcctttggggtccagccagagccgactgggatccattgacagttcccattcattc
tccaaccgcaatgatctaaatcactggaatggtgctgggctgtcgggaactagcagtgga
gaccttcatggcacttcactctgggggaccccgaattattccacaagcctgtgggggacc
ccgaacagcagtgacaccaggggaattagcagcccatcccccatcaatgctttcctttct
gttgaccacctaggtggaggtggagagtccatgtaa
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