Petaurus breviceps papuanus (sugar glider): 138177078
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Entry
138177078 CDS
T10505
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138177078 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrv03019
]
138177078 (PATL1)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138177078 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
138177078 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
138177078
NCBI-ProteinID:
XP_068964164
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MFRYESLEDCPLDEDDDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEEKP
VVAVEQTGNGSTDEMDLLGDHEENLAERLSKMVIDNELEDPAIMRALQTRPVVQPGGLSS
SIWDGSAVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGLEEERDLSERALPRRSTSPVIG
SPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRAPMQQRYPAPYGERMSPNQLCGVANS
SLLGHPFPPSVAPVLSPIQRAQLLGGAQPGRMSPSQFARLSGFVSSPLATMNPKLLQGRV
GQMIPPAPGFRAFFGAPPPATPPPAQQHPSCPGPHLQNLRPQSQMFRPDTTHLHPQHRRL
LHQRQQQNRNQHRSINGAAGERGGHRSSHQEQLWKDPYANLMLQREKDWVSKIQMMQLQS
TDPYLDDFYYQNYFEKLEKLSAAEEVHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLG
KLTVSSVNNPRKMIDAVVTSRSEDDETKDKQVRDKRRKTLVTIEKTYSLLLDVEDYERRY
LLSLEEERQALMEERKQKICGMYDNLRGKLPGQERPSDDPFIQIMCIRKGKRMVARILPF
LSREQAADVLLATARNLPFLIKKDAQDEVLPCLLNPFSLLLYHLPSMTVTSLLQQLMNLP
QSAAAPAPANPHLTAVLQNKFGLSLLYLVLSRGEELQSSEPSPELMQDNQWTELMFIATR
ELLRIPQATLAKPVSTPANLASLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgctacgagtccctagaagattgtcctctggatgaagatgatgatgcttttcag
gctctgggggaagaagatgaagatattgatcaattcaatgatgacacgtttggagcaggt
gcagttgatgatgattggcaggaagcacacgagcgcctggccgaattggaagagaagcca
gtggtggcagttgaacagactggcaatgggagcactgatgagatggacttgctgggagac
catgaagaaaacctggctgaaagactcagtaaaatggtgattgataatgaactggaggac
ccagctatcatgagggcactgcagaccaggccagttgtgcagcctggaggtctcagttct
agcatttgggacggctctgcagttctgagacgcatccgaggaccacttcttgctcaggaa
atgcctacagtgtctgtgttagaatatgccttgcctcagagacccccccagggcctggaa
gaagagcgggacctttctgagcgggccttaccgaggcgttcaacttctcccgtcattggg
agccctcctgtcagagcggttccaataggcaccccacctaagcagatggctgtacccagc
tttaaccagcagattctttgtccgaagcctgttcatgttcgtgccccgatgcaacagcga
tatccagctccctatggcgagaggatgtctccaaaccagctgtgcggtgttgcgaactct
tcccttctgggccacccgttccctcccagtgtcgcgcctgttctcagccctattcagagg
gcacagcttctgggaggagctcagcctggacggatgtctcccagccagtttgctcggctc
tctggatttgtaagcagtcctcttgctactatgaatcccaagttgcttcagggacgggtt
gggcaaatgattcccccagctcctggcttccgtgccttctttggcgcacctccaccagct
acaccacccccagcacagcagcatccctcctgcccaggacctcacctacaaaacctaaga
cctcagtcccagatgttcagaccagacacaactcaccttcacccacagcaccgtcgactc
ttacatcagagacagcagcagaacagaaatcaacatcgaagtatcaatggtgcagctggg
gagcgaggtggtcaccggagcagccatcaggagcagttatggaaggacccatatgcaaac
cttatgttacagcgggagaaggactgggtctccaagatccagatgatgcagttacaaagc
actgatccctacctggacgacttttattaccagaactactttgagaaactggagaaactc
tcagcagctgaggaagtgcatggagatggccctaagaaagaacgcaccaagctgatcact
ccccaagtggcaaagctggagcatgcctacaagccagtgcaatttgagggctctttggga
aagcttactgtctctagtgtgaacaatccccggaaaatgatcgatgctgtggtaacatcc
cggagtgaagatgatgagaccaaagacaaacaagttcgggacaagagacgaaagactctc
gttacaattgagaaaacatacagtctgctcctggatgtggaggattatgaaaggcgctat
ctcctaagcttagaagaggagcggcaggcactgatggaggagagaaagcagaagatatgt
ggcatgtacgacaacctgaggggaaagttgcctgggcaagagaggccaagtgatgacccc
tttatacaaatcatgtgtatccgtaaagggaagagaatggttgcccgtattctgcctttc
ttgtccagagagcaagctgctgacgtcctcttggcaacagccaggaacttgccctttctg
atcaagaaggatgcccaagatgaggttttaccttgcttattgaaccccttttcccttctc
ctgtatcatcttccatcaatgactgtcaccagccttctgcaacagctaatgaacctacct
cagagtgcagctgcaccagcacccgccaacccacacctcactgctgtgctccagaacaag
tttggcctgtcattgctctacctggtcctgagccgaggagaagagctgcagagttcagag
ccatctccggagttaatgcaggacaaccagtggacagagttgatgttcattgccacgaga
gaactcctgcggattccccaggccaccctggctaagcccgtctccacccctgcaaacctg
gcatccctcttttcccgatatgttgaccgacagaagctgaacctgcttgagacaaaattg
cagttggttcaggggatccggtag
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