Paraburkholderia bryophila: NDK50_00075
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Entry
NDK50_00075 CDS
T08797
Symbol
istA
Name
(GenBank) IS21 family transposase
Organism
pbry
Paraburkholderia bryophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_17
HTH_11
HTH_24
HTH_23
Sigma70_r4_2
HTH_38
MerR
Sigma70_r4
HTH_29
HTH_IclR
HTH_28
HTH_36
HTH_3
HTH_DeoR
TnsD
HTH_31
HTH_50
HTH_10
AbiEi_4
HTH_7
Phage_NinH
HTH_AsnC-type
NUMOD1
GntR
HTH_22
Rv2175c_wHTH
HTH_30
HTH_Tnp_4
TetR_N
HTH_Tnp_ISL3
MerR_1
LacI
KfrA_N
HTH_Tnp_Tc3_1
DUF1804
HTH_8
Motif
Other DBs
NCBI-ProteinID:
WCM19921
LinkDB
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Position
1:16071..17597
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AA seq
508 aa
AA seq
DB search
MIDVAILSIIRRWHFRDHVSLREIAKRLGVSRNTVRRYIRAGTVLPAYPERHSPSKLDGF
AAKLAGWLKTEATRPRKQRRTLKQIHADLCALGFTGSYDRVAAFARRWRQEQHEQAKTTG
RGTFVPLRFAAGEAFQFDWSEDWAVINGERTKLQVAQLKLSHSRAFFLRAYLLQTHEMLF
DAHHHAFVAWGGIPRRGIYDNMKTAVDRVRPGKVREVNARFSAMVSHYLFDAEFCNVASG
WEKGQIEKNVQDSRHRLWQKVPTFGSLAALNDWLADQCVLLWQQTRHPEQDTTIWDAWSA
ERPHLMPVGQPFDGFVEHTKRVSPTCLVNFERNRYSVPASFANRPISLRVYAARLVFVAE
GQVIAEHERCINRSHDHGETIYDWRHYLAVLQRKPGALRNGAPFAEFPAGFRKLQGVLLK
RPGGDREMVDILALVLLHDEQMVLTAVELAFEAGAPNKQTVLNILSRLLDSPPVPPLQTP
QAFALKVEPQANVGRYDRLRNREDDHAA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgtggctatattgagcatcatccgacgctggcactttcgcgatcatgtctcg
ttgcgcgagattgccaaacggctgggcgtgtccagaaacacggtcaggcgttacatacgg
gccggcaccgtactgcccgcctatcccgaacgtcacagccccagcaagctcgacgggttc
gcggcgaagcttgctggctggttgaagaccgaggcaacgcgaccacgcaaacagcgcaga
accctcaagcagatccacgcggacctctgtgcactgggcttcaccggctcctatgaccgg
gtcgcggcatttgcccgacgctggcgacaggagcagcacgagcaggcaaagacgaccgga
cgcggaacgtttgttcccctccggtttgctgcaggcgaagcgttccagttcgactggagc
gaggactgggccgtcatcaacggcgagcgtaccaagctgcaggtcgcgcaactcaagctc
agccacagtcgggccttcttcctgcgggcctacctgctgcagactcacgagatgctgttc
gacgcccatcatcacgcgttcgtcgcctggggcggcattccacgccgcggcatctacgac
aacatgaagaccgccgtcgaccgggtgcgtcccggcaaggtgcgcgaggtcaacgcgcgg
ttcagcgcgatggtaagccactacctgtttgacgccgagttctgcaacgtcgcctccggc
tgggagaaggggcagatcgagaagaacgtccaggacagccgtcaccggctctggcagaag
gtgccaacgtttggctcgctggcggcgttgaacgactggctggccgatcagtgcgtgctg
ctgtggcaacagacacgtcacccggagcaggacacgacgatatgggatgcgtggtcggcc
gagcgtccccacctgatgccggtgggccagccgttcgatggtttcgttgaacacaccaaa
cgcgtctcgccaacctgcctcgtgaacttcgagcgcaaccgctacagcgtaccggcgtcg
ttcgccaaccggcccatcagtctgcgcgtctacgccgccaggctcgtgttcgtcgccgaa
ggccaggtgattgccgaacacgagcgctgtatcaaccgcagccatgaccacggcgaaacc
atttacgactggcgtcactacctggcagtcctgcagcgcaaacctggagcgcttcgcaat
ggcgcgccattcgccgagtttccagccggcttccgcaaactgcagggcgtgctgctgaag
cgccccggcggcgaccgggagatggtcgatattctggcgctggtcctgctgcacgacgaa
cagatggtgctcactgccgtcgagctggcgttcgaggccggcgcaccgaacaagcagacg
gtgctgaacatcctgagccggctgctcgacagcccgcctgtgccgccgcttcagacgcca
caggccttcgcacttaaggttgagccgcaggccaacgtgggccgctacgaccgcctgagg
aatcgggaggacgatcatgcagcctga
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