Paraburkholderia bryophila: NDK50_00405
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Entry
NDK50_00405 CDS
T08797
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00550
Peptidoglycan biosynthesis
pbry01100
Metabolic pathways
pbry01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NDK50_00405 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NDK50_00405 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbry01011
]
NDK50_00405 (mrdA)
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NDK50_00405 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbry01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NDK50_00405 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WCM19979
LinkDB
All DBs
Position
1:complement(92155..94476)
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AA seq
773 aa
AA seq
DB search
MTEFKDTQQQLSKFRLRVAAAGLFVFVCFGLIGFRFLFLQVWHYSKYSLQADENRISVAP
IVPNRGIITDRNGVVLAKNYSAYTLELTPSKLNDSIENVIDSLATVVSIDARDRRRFKKL
QEDSKNFESLPIRTRLTDDEVARFTAQRFRFPGVEVRARLFRQYPLGPTAAHVIGYIGRI
SQRDQDRIDDASDQNDSDPDHYDPRLDANNYKGTDYIGKIGVEQSYETELHGQTGFEEVE
VTAGGRPVRTLSRTQATPGNNLELSLDIGLQQVAEQAFAGRRGALVAIEPATGDVLAFVS
APSFDPNSFVDGIDQQTWDDLNNSPDHPLLNRPLHGTYPPGSTYKPFMALAALTLHKRTT
GWGFQDPGSYTFGGHTFRNDVRSGQGWVDMNRAIVVSNDTYFYMLAHDLGVNNIANFMKP
WGFGQITGIDISGEARGILPSTDWKRKAYRKPEQQRWYEGETISLGIGQGYNSFTILQLA
HATATLANNGVVMKPHLVRDIENPITKETRAVVRDPSDKIAVKQADIDFIKHAMAEVVTN
GTASKLFIGAPYQAAGKTGTAQVYSLQGANYKGHAIAEHLRDHALFIAFAPVDNPKIALA
LIVENGGWGAESAGPIARKVLDYYLVGKNKPGAQAAAIAAAASATQDASAPVVGGAPASD
ETAVQPVKIAAGFTALPIPGAASAAAAASAAEAASAAAAASAPAVGASAAAAKGASASTS
TSTATKNPAPRKPGVPHKPRPASEPAPTAAAPSRDDGIEATSPRQPVAGGIDE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaaggacactcagcaacagctctcgaagttccgcctgcgcgtcgcggcg
gcgggcctgttcgtgttcgtctgcttcgggctgatcggcttccgcttcctgttcctgcag
gtctggcactacagcaaatactcgctgcaggccgatgaaaaccgcatttccgtcgcgccg
atcgtgccgaaccgcggcatcatcaccgatcgtaacggcgtggtgctggccaagaactac
tcggcctacacgctcgaactgacgccgtcgaaactcaacgactcgatcgaaaacgtgatc
gacagtctggcgacggtcgtctcgatcgacgcgcgcgaccggcgccgcttcaagaagctt
caggaagactcgaagaacttcgagagcctgccgatccgcacccgcctgaccgacgacgaa
gtcgcgcgcttcaccgcgcagcgtttccgcttccccggcgtggaagtgcgcgcgcggctg
ttccgccaatatccgctcgggccgaccgcggcgcacgtgatcggctacatcgggcggatt
tcgcagcgcgaccaggaccgtatcgacgacgccagcgaccagaacgacagcgatccggac
cactacgatccgcgtctcgacgcaaacaactacaagggcaccgactacatcggcaagatc
ggcgtcgagcagagctatgaaaccgaactgcacggtcagaccggtttcgaagaagtggaa
gtgaccgccggcggccggccggtgcgcaccttgtcgcgcacccaggccacgcccggtaac
aacctcgaactgtcgctggatatcggcttgcagcaggttgccgaacaggcgttcgcgggt
cgccgcggcgcgctggtcgcgatcgaaccggctaccggcgacgtgctcgcgttcgtgtcc
gcgccgagcttcgatcccaattcgttcgtcgacggtatcgaccagcagacctgggacgac
ctgaacaactcgccggatcacccgttgctgaaccgtccgttgcacggcacctatccgccg
ggatcgacatataagccgttcatggcgctcgcggcgctgacgctgcataagcgcacgacg
ggctggggcttccaggatccgggttcgtacaccttcggcggccacacgttccgcaacgac
gtgcgctcgggccagggctgggtcgacatgaaccgcgcgatcgtcgtgtcgaacgacacg
tatttctacatgctcgcgcatgacctcggcgtcaacaacatcgccaacttcatgaagccg
tggggcttcggccagatcaccggcatcgacatttccggcgaagcgcgcggcatcctgcct
tccacggactggaagcgcaaggcgtaccgcaagcccgaacagcagcgttggtatgaaggc
gaaacgatcagtctcggcatcggccagggctacaactcgttcaccattctgcaactcgcg
cacgccacggcgacgctcgcgaacaacggcgtcgtgatgaagccgcatctcgtgcgcgac
atcgagaatccgatcaccaaggagacccgcgcagtggtgcgcgatccgagcgacaagatc
gccgtcaagcaggcggacatcgacttcatcaagcatgcgatggccgaagtggtcaccaac
gggacggcgtcgaagctgtttatcggcgctccgtatcaagcggccggcaagaccggtacg
gcccaggtgtactcgctgcaaggcgcgaactacaagggtcacgcgatcgccgagcatctg
cgcgatcacgcactgttcatcgctttcgcgccggtcgacaaccccaagatcgcgctcgcg
ctgatcgtcgaaaacggtggctggggcgcggaatcggccggtccgatcgcgcgcaaggtg
ctcgattactacctcgtcggcaagaacaagccgggcgctcaggcggcggcgatcgccgcg
gcggcgtcggcgacccaggatgcatccgcgcctgtagtgggcggcgcaccggcttccgat
gaaaccgccgtgcagccggtcaagatcgccgctgggtttacggcgctgccgattcccggt
gcggcttcggcggcggctgcggcttccgcggcagaggcggcgtccgctgcggcagcggcg
tcggcgccggccgttggtgcttcggctgcggccgcgaagggggcttcagcctctacgtcc
acctccaccgccacaaaaaatccggcgccgcgcaagcctggcgtcccgcataagccccgc
cccgccagcgagccggcgccgaccgccgccgcgccgtcgcgggatgacggcattgaagcc
acgtcgccacgccagccggttgccggcggcatcgacgagtaa
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