Paraburkholderia bryophila: NDK50_01810
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Entry
NDK50_01810 CDS
T08797
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbry03021
]
NDK50_01810 (rpoH)
Transcription machinery [BR:
pbry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NDK50_01810 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WCM20239
LinkDB
All DBs
Position
1:complement(391436..392371)
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AA seq
311 aa
AA seq
DB search
MSHAMTLPSTLSPSAAKAASAGALALSHSSLLPGQLGNIDAYIQAVNRIPMLTPAEERQF
ATEFREQDNLASARRMVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPEQ
NVRLVSYAMHWIKAEIHEYILRNWRMVKVATTKAQRKLFFNLRSHKQGLGAFTPDQIDDL
AKELNVKREEVSEMETRLSGGDIALEGQVEDGEEAYAPIAYLADSHSEPTAVLASRQRDK
LQSDGIASALNALDARSRRIIEARWLKVEDDGSGGSTLHELADEFGVSAERIRQIEASAM
KKMRGALTDYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgagccatgcaatgacccttccgagtactctgagcccgtcggcggctaaggccgcttcg
gcaggtgcactggcgctctcgcattcctcgctgctgcccggccaactgggcaatatcgac
gcctacatccaggccgttaatcggattccgatgctgacgccggcagaagaacgccagttc
gccaccgaatttcgcgagcaggacaaccttgcgtccgcgcgccgtatggtgctgtcgcac
ttgcgcctggtcgtgtcgatcgcgcgcaactatctcggttatggcctgccgcacgccgac
ctgatccaggaaggcaacatcggcctgatgaaggccgttaaacgcttcgacccggagcag
aacgtgcgcctcgtgtcgtacgccatgcactggatcaaggctgagatccatgaatacatt
ctgcgcaactggcggatggtgaaggtcgccaccaccaaggcgcaacgcaagctgttcttc
aacctgcgcagccacaagcaggggctgggcgcgttcacgccggaccagatcgacgatctg
gccaaagagctgaacgtgaagcgcgaagaagtctccgaaatggaaacgcgtttgtcgggc
ggcgatatcgcgctcgaaggccaggtggaagacggtgaagaggcgtacgcgccgatcgcc
tatctggccgactcgcatagcgaaccgactgccgtgctggcttcgcgccaacgcgacaag
ctgcaaagcgacggtatcgcgagcgcgctgaacgcgctggacgcccgcagccgccgcatt
atcgaggcacgctggctgaaggtggaagacgacggttcgggcggctcgacgctgcacgaa
ctcgccgacgagttcggcgtgtcggcggaacggattcgccagatcgaagccagcgccatg
aagaagatgcgcggcgccctgaccgactatgcgtaa
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