Paraburkholderia bryophila: NDK50_02010
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Entry
NDK50_02010 CDS
T08797
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NDK50_02010 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_02010 (uvrA)
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NDK50_02010 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NDK50_02010 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
BCA_ABC_TP_C
AAA_23
nSTAND1
DnaJ_CXXCXGXG
AAA_21
nSTAND3
RsgA_GTPase
AAA_25
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
WCM20275
LinkDB
All DBs
Position
1:complement(429503..432376)
Genome browser
AA seq
957 aa
AA seq
DB search
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPEETKLMILAPVVADRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGVAKIYEVDALPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDKEKLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYEFDIDMAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRTSVREHVFEGIIPNLERRYRETDSVAVREELAKYQNNQPCPACAGT
RLRREARFVRIGADSDARGIFEISGWPLRDALGYFQTLRLEGSKREIADKVVKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
ATLKHLRDLGNSVVVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANPASMT
GQYMSGARNIEYPDERKAPDERRLRIVEAYGNNLKHVTLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVSHHLYGSSTEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFSGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVENAYEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLSEQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAKSKASFTGKYLAPLLKRAASKK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaaatccgtattcgtggggctcgcacccacaacctgaagaacgtcaacctcgat
cttccacgtcacaagctcgtcgtcattacgggcctttcgggctcgggcaaatcgtcgctg
gcgttcgacacgctctatgcggaaggacagcggcgctacgtcgaaagtctttcggcctat
gcgcgccagttcctgcaattgatggaaaaacccgatgtcgatctgatcgaaggcctgtcg
ccggcaatctcgatcgagcagaaagcgacctcgcacaatccgcgctccacggtcggcacc
gtcaccgaaattcacgactatctgcggctcctgttcgcccgggtcggcacgccgtattgt
ccggaccacgaaatcccgctggaggcgcaaagcgtctcgcaaatggtcgacgcggcgctc
gccctgcccgaagaaacgaagctgatgatcctcgcgccggtcgtggccgaccgcaagggc
gagcacgtcgagctgttcgaggaaatgcaggcccagggctttatccgtttccgcgtgcgc
tcgggcggcggcaccgcgaatgaaggcgtcgcgaagatctatgaagtcgacgcgctaccg
aagctgaaaaagaacgacaagcacaccatcgacgtcgtggtcgaccgtctgaaagtgcgg
ccggacatgaagcagcgcctcgccgaatcgttcgaaacggcactgcgtctcgccgacggc
cgcgcgatcgcgctcgaaatggacaccgacaaagagaagctgttcagctcgaagttcgcc
tgcccgatctgctcgtattcgctgcaggaactggagccgcggctgttctcgttcaacaac
cccatgggcgcgtgcccggaatgcgacggcctcggccagatcaccttcttcgatccgaag
cgggtggtcgcgcatccgtcgctgtcgctcgcggccggcgcggtcaagggctgggaccgg
cgcaaccagttctacttccagatgctgcagagtctcgcggcgttctacgagttcgacatc
gacatggcggtcgaagatctgccggagaaggttcgcaagatcctgctgttcggttcgggc
aaacaggaaattccgttctcgtacatcaacgaacgcggccgcacgtcggtgcgcgagcac
gttttcgaagggatcatcccgaacctggagcggcgctaccgcgagaccgattcggtcgcg
gtgcgcgaagaactcgccaagtatcagaacaaccagccctgccccgcttgcgccggcacg
cggctgcgccgcgaagcgcgcttcgtgcggatcggcgcggacagcgatgcgcgcggcatc
ttcgaaatcagcggctggccgttgcgcgacgcgctcggctatttccagacgctgcgtctg
gaaggctcgaagcgcgagatcgccgacaaggtggtcaaggaaatcgtcgcgcggctcatg
tttctgaataacgtcgggctcgattacctgtcgctcgaacgcagcgcggaaacgctgtcg
ggcggcgaggcgcagcgcattcgcctcgcctcgcagatcggctcgggcctgaccggcgtg
atgtacgtgctggacgagccgtccatcggcctgcaccagcgcgacaacgaccggctgatc
gccacgctgaagcatctgcgcgacctgggcaactcggtggtcgtcgtcgagcatgacgaa
gacatgatccgcatggccgattacgtggtcgacatggggccgggtgcgggcgaacacggc
ggcatggtgatcgcggaaggcacgccgaaacaggtgcaggcgaacccggcgtcgatgacc
gggcagtacatgtccggcgcgcgcaacatcgagtatccggacgagcgcaaggcgccggac
gaacggcgtctgcggatcgtcgaggcatacggcaacaacctgaagcacgtaacgctggat
ctgccggtcggcctgctcacctgcgtgaccggcgtatccggctcgggcaagtcgacgctg
atcaacgacacgctgtaccacgcggtctcgcatcacctgtatgggtcgtccacggagccg
gcgccgtacgagtcgatcgaaggcctcgagcacttcgacaaggtcatcaatgtcgaccag
tcgccgatcggccgcacgccgcgctcgaacccggccacctacacgggcctcttcacgccg
atccgcgaactgttctcgggcgtgcccgcggccaaggaacgcggctacgatccgggccgt
ttctcgttcaacgtcaagggcggccgctgcgaatcctgccagggcgacggcgtgctgaag
gtcgagatgcactttttgccggacgtgtacgtgccttgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctggacgtgcaatacaaaggcaagaacatcagcgaagtgctcgat
atgacggtggagaacgcctacgagttcttcaagccggtgccggtcgtcgcgcgcaagctg
aaaaccttgctggacgtgggtctgggctatatccgcctgggccagtcggcaaccacgctg
tcgggcggcgaggcgcagcgggtcaaactatcgttggaactgagcaagcgcgacacgggt
cgcactctatacattctcgacgagccgaccaccggcctgcactttcacgatatcgcgctg
ctgctggaagtcatccatcggttaagcgagcagggtaatactgtcgtgatcatcgagcat
aatctcgatgtaataaaaaccgccgactgggtcatcgacctcggtccggaagggggtgcg
ggcggcggtcagatcattgcccagggcacgccggagcaggtggcgaagtcgaaagcaagt
tttaccggaaagtatctggcgcccttgctgaaacgggccgccagcaaaaagtaa
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