Paraburkholderia bryophila: NDK50_04055
Help
Entry
NDK50_04055 CDS
T08797
Name
(GenBank) arginine/lysine/ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00330
Arginine and proline metabolism
pbry01100
Metabolic pathways
pbry01110
Biosynthesis of secondary metabolites
Module
pbry_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NDK50_04055
Enzymes [BR:
pbry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
NDK50_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
SP2_C
Motif
Other DBs
NCBI-ProteinID:
WCM20654
LinkDB
All DBs
Position
1:910757..913042
Genome browser
AA seq
761 aa
AA seq
DB search
MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGAEVLGLTSYGDLTSFAQQSSRASCF
ILSIDDDELLPYVDNVVVEGETPELAAAIVALRAFVTEVRRRNADIPIFLYGETRTSRHL
PNDILRELHGFIHMFEDTPEFVARHIIRETKVYLDSLAPPFFKELVQYADEGSYSWHCPG
HSGGVAFLKSPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSAD
HVFFVTNGTSTSNKIVWHGTVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNNFGI
IGPIPRSEFEPENIRKKIEANPFAREALAKNPGLKPRILTITQSTYDGVIYNVEMIKEML
GDWLDTLHFDEAWLPHAEFHEFYQDMHAIGAGRPRIGALVFATHSTHKLLAGISQASQIV
VQDSKNSRFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEAPGGPALVEESIAEALDF
RRAMIKVDAEYGDDWFFKVWGPEQFAEEGIGSREDWVLRPNDAWHGFGPLAEGFNMLDPI
KATIVTPGLDMDGGFGESGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSM
VTELQQFKDDYDNNQPLWRVLPEFVAHHPMYERVGLRDLCQQIHGVYRANDIARLTTEMY
LSSMEPAMKPSDAFAKLAHREIDRVPIDELEGRVTSILLTPYPPGIPLLIPGERFNKTIV
NYLRFAREFNERFPGFHTDIHGLVGETINGRIEYFVDCVRG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgttttcccgtcgtcatcatcgacgaagattttcgctccgagaatatctcg
ggttccggcatccgggctctggccgaagccatcgaaaaagaaggcgcggaagtcctcggg
ttgacgagctacggcgatctgacttcgttcgcgcagcagtcgagccgcgcgtcgtgtttc
atcctgtcgatcgacgacgacgaactgctgccctacgtcgataacgtggtggtggaaggc
gagacgcccgaactggccgccgcgatcgtcgccttgcgcgcgttcgtgaccgaagtgcgc
cgccgcaacgcggacattccgatcttcctgtacggcgaaacgcgcacgtcgcgccacttg
ccgaacgatatcctgcgcgaactgcatggtttcatccacatgttcgaggacacgccggaa
ttcgttgcgcgccatatcatccgcgaaaccaaggtgtatctggactcgctcgcgccgccg
ttcttcaaggaactggtgcagtacgcggacgaaggttcgtactcgtggcactgcccgggg
cactcgggcggcgtggcgtttttgaagagcccgctcggccagatgttccaccagttcttc
ggcgagaacatgctgcgcgccgacgtgtgtaacgccgtcgacgaactcggtcaactgctc
gaccacaccggtccggtggcggcctccgagcgcaacgccgcgcgcattttcagcgccgac
cacgtgttcttcgtgaccaacggcacgtccacctcgaacaagatcgtctggcacggcacg
gtcgcgccgggcgacatcgtgctggtggaccgcaattgccacaagtcgatcctgcacgcg
atcaccatgaccggcgcgattccggtgttcctgacgccgacgcgcaacaacttcggcatc
atcggcccgattccgcgcagcgagttcgagccggaaaacatccgcaagaagatcgaggcg
aatccgttcgcgcgcgaagcgctggcaaagaacccgggtctcaagccgcgcattctgacg
atcacgcagagcacttacgacggcgtgatctacaacgtcgagatgatcaaggagatgctc
ggcgactggctcgacacgctgcacttcgacgaagcctggctgccgcacgccgaattccac
gagttctatcaggacatgcacgcgatcggcgcggggcgtccgcggatcggcgcgctggtg
ttcgcgacgcactccacgcacaagctgctggccggtatttcgcaggcgtcgcagatcgtc
gtgcaggattcgaagaacagccgcttcgacaagcatcgcttcaacgaagcgtatttgatg
cacacgtcgaccagcccgcagtacgcgatcatcgcctcgtgcgacgtggccgctgccatg
atggaagcgccgggcggtcccgcgctggtggaggaatcgatcgccgaagcgctcgatttc
cgccgcgcgatgatcaaggtcgacgccgaatacggcgacgactggttcttcaaggtgtgg
ggcccggaacagttcgccgaggaaggcatcggctcgcgcgaggactgggtgctgcgtccg
aacgacgcatggcacggtttcggcccgttggccgaaggcttcaacatgctcgacccgatc
aaggcgaccatcgtcacgccgggcctggacatggacggcggcttcggcgagtccggcatt
ccggccgcgatcgtcacgaagtatctggccgagcacggcatcatcgtcgagaagaccggg
ctgtattcgttcttcatcatgttcacgatcggcattaccaagggccgctggaactcgatg
gtcaccgaactgcagcagttcaaggacgactacgacaacaaccagccgctgtggcgcgtg
ctgcccgagttcgtcgcgcatcaccccatgtacgagcgcgtcggtctgcgcgatttgtgc
cagcagatccacggcgtctatcgtgccaacgacattgcgcgcctgacgaccgagatgtac
ctgtcgagcatggaaccggcaatgaagccgtccgacgcgttcgccaagctcgcgcaccgc
gagatcgaccgggtaccgatcgacgaactcgaaggccgcgtcacgtcgatcctgttgacg
ccgtatccgccgggcattccgctgctgattccgggcgagcgcttcaacaagaccatcgtc
aactatctgcgcttcgcgcgtgagttcaacgagcgcttcccggggttccatacggatatc
catgggttggtgggcgaaacgatcaacgggcgcatcgaatacttcgtcgattgcgtgcgc
ggttga
DBGET
integrated database retrieval system
