Paraburkholderia bryophila: NDK50_07160
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Entry
NDK50_07160 CDS
T08797
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00010
Glycolysis / Gluconeogenesis
pbry00020
Citrate cycle (TCA cycle)
pbry00260
Glycine, serine and threonine metabolism
pbry00280
Valine, leucine and isoleucine degradation
pbry00310
Lysine degradation
pbry00380
Tryptophan metabolism
pbry00620
Pyruvate metabolism
pbry00630
Glyoxylate and dicarboxylate metabolism
pbry00640
Propanoate metabolism
pbry00670
One carbon pool by folate
pbry00785
Lipoic acid metabolism
pbry01100
Metabolic pathways
pbry01110
Biosynthesis of secondary metabolites
pbry01120
Microbial metabolism in diverse environments
pbry01200
Carbon metabolism
pbry01210
2-Oxocarboxylic acid metabolism
pbry01240
Biosynthesis of cofactors
Module
pbry_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pbry_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pbry_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pbry_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pbry_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NDK50_07160 (lpdA)
00020 Citrate cycle (TCA cycle)
NDK50_07160 (lpdA)
00620 Pyruvate metabolism
NDK50_07160 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NDK50_07160 (lpdA)
00640 Propanoate metabolism
NDK50_07160 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NDK50_07160 (lpdA)
00280 Valine, leucine and isoleucine degradation
NDK50_07160 (lpdA)
00310 Lysine degradation
NDK50_07160 (lpdA)
00380 Tryptophan metabolism
NDK50_07160 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NDK50_07160 (lpdA)
00670 One carbon pool by folate
NDK50_07160 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbry04147
]
NDK50_07160 (lpdA)
Enzymes [BR:
pbry01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NDK50_07160 (lpdA)
Exosome [BR:
pbry04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NDK50_07160 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
AlaDh_PNT_C
GIDA
HI0933_like
NAD_binding_8
FAD_oxidored
FAD_binding_3
DAO
3HCDH_N
Thi4
Lys_Orn_oxgnase
Lycopene_cycl
Amino_oxidase
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
WCM21224
LinkDB
All DBs
Position
1:1639921..1641351
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AA seq
476 aa
AA seq
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MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKAL
LASSEEFENASHHLGDHGISVENVKVDIAKMLARKESIVEKMTKGIEFLFRKNKITWLKG
HGKFTGKTDAGVQIEVSGEGETEVVTAKNVIIATGSKARHLPGIPVDNRIVADNEGALTF
DTVPKKLAVIGAGVIGLELGSVWRRLGADVTVLEALPEFLGAADQSLAKEAAKQFKKQGL
DIHVGVKVGEIKATDKNVTIAYTDKDGNAQSLEADRLIVSIGRVPNTDNLGLEAIGLKAN
ERGFIDVDDHCATAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEIIDGQKPHIDYNCIPWV
IYTEPEIAWVGKTEQQLKAEGREVKTGQFPFMANGRALGINKADGFVKMIADAKTDELLG
VHIISANASDLIAEAVVAMEFKAASEDLGRICHPHPSLSEVMREAALAVDKRALNM
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaatttgacgtcgtcgtgatcggcgcaggccccggcggttatatcgccgcc
atccgcgcagcgcaactcggcaagaccgtcgcgtgtatcgagaaatggaagaacccggcc
ggcgcgctgaagctcggcggcacctgcctgaacgtgggttgcattccgtcgaaggcgctg
ctcgcgtcgtcggaagaatttgaaaacgcatcgcatcacctgggcgaccacggcatctcc
gtggaaaacgtcaaggtcgacatcgcgaagatgctggcccgcaaggaaagcatcgtcgag
aagatgaccaagggtatcgaattcctgttccgcaagaacaagatcacgtggctcaagggt
catggcaagttcaccggcaagacggacgccggcgtgcagatcgaagtgagcggcgaaggc
gaaacggaagtcgtcacggcaaagaacgtgatcatcgccacgggttcgaaggcgcgccat
ctgccgggcattccggtcgacaacaggatcgttgccgacaacgaaggcgcactgacgttc
gacaccgtgccgaagaagctggccgtgatcggcgccggcgtgatcggtctggaactcggt
tcggtgtggcgtcgtctgggcgcggacgtgaccgtgctcgaagcgttgccggaattcctc
ggcgcggctgaccagtcgctcgctaaagaagccgccaagcagttcaagaagcagggtctc
gacattcacgtcggcgtgaaggtcggcgaaatcaaggcaacggacaagaacgtcacgatc
gcctacacggacaaggacggcaacgcgcaatcgctcgaagccgaccgtctgatcgtgtcg
atcggccgcgtgccgaacaccgacaacctcggcctcgaagcgatcggcctgaaggccaac
gaacgcggcttcatcgacgtcgacgaccattgcgcgacggcggtgccgaacgtgtacgcg
atcggcgacgtggtgcgtggcccgatgctcgcgcacaaggcggaagacgaaggcgtgctg
gtggccgagatcatcgacggtcagaagccgcatatcgactacaactgcattccgtgggtg
atctacaccgaaccggaaatcgcgtgggtcggcaagaccgaacagcaactcaaggcggaa
ggccgcgaagtcaagacgggccagttcccgttcatggcgaacggccgcgcgctgggcatc
aacaaggcggatggtttcgtcaagatgatcgccgacgcgaagaccgacgaactgctcggc
gtgcatatcatctcggccaacgcatcggacctgatcgcggaagccgtggtggcgatggag
ttcaaggcggcgtcggaagatctcggccgcatttgccatccgcacccgtcgctgtcggaa
gtcatgcgcgaagcggctctggccgtggacaagcgcgcgctgaacatgtaa
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