KEGG   Paraburkholderia bryophila: NDK50_07160
Entry
NDK50_07160       CDS       T08797                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pbry  Paraburkholderia bryophila
Pathway
pbry00010  Glycolysis / Gluconeogenesis
pbry00020  Citrate cycle (TCA cycle)
pbry00260  Glycine, serine and threonine metabolism
pbry00280  Valine, leucine and isoleucine degradation
pbry00310  Lysine degradation
pbry00380  Tryptophan metabolism
pbry00620  Pyruvate metabolism
pbry00630  Glyoxylate and dicarboxylate metabolism
pbry00640  Propanoate metabolism
pbry00670  One carbon pool by folate
pbry00785  Lipoic acid metabolism
pbry01100  Metabolic pathways
pbry01110  Biosynthesis of secondary metabolites
pbry01120  Microbial metabolism in diverse environments
pbry01200  Carbon metabolism
pbry01210  2-Oxocarboxylic acid metabolism
pbry01240  Biosynthesis of cofactors
Module
pbry_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pbry_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pbry_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pbry_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pbry_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pbry00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NDK50_07160 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NDK50_07160 (lpdA)
   00620 Pyruvate metabolism
    NDK50_07160 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NDK50_07160 (lpdA)
   00640 Propanoate metabolism
    NDK50_07160 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NDK50_07160 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NDK50_07160 (lpdA)
   00310 Lysine degradation
    NDK50_07160 (lpdA)
   00380 Tryptophan metabolism
    NDK50_07160 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NDK50_07160 (lpdA)
   00670 One carbon pool by folate
    NDK50_07160 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pbry04147]
    NDK50_07160 (lpdA)
Enzymes [BR:pbry01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NDK50_07160 (lpdA)
Exosome [BR:pbry04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NDK50_07160 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 AlaDh_PNT_C GIDA HI0933_like NAD_binding_8 FAD_oxidored FAD_binding_3 DAO 3HCDH_N Thi4 Lys_Orn_oxgnase Lycopene_cycl Amino_oxidase XdhC_C
Other DBs
NCBI-ProteinID: WCM21224
LinkDB
Position
1:1639921..1641351
AA seq 476 aa
MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKAL
LASSEEFENASHHLGDHGISVENVKVDIAKMLARKESIVEKMTKGIEFLFRKNKITWLKG
HGKFTGKTDAGVQIEVSGEGETEVVTAKNVIIATGSKARHLPGIPVDNRIVADNEGALTF
DTVPKKLAVIGAGVIGLELGSVWRRLGADVTVLEALPEFLGAADQSLAKEAAKQFKKQGL
DIHVGVKVGEIKATDKNVTIAYTDKDGNAQSLEADRLIVSIGRVPNTDNLGLEAIGLKAN
ERGFIDVDDHCATAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEIIDGQKPHIDYNCIPWV
IYTEPEIAWVGKTEQQLKAEGREVKTGQFPFMANGRALGINKADGFVKMIADAKTDELLG
VHIISANASDLIAEAVVAMEFKAASEDLGRICHPHPSLSEVMREAALAVDKRALNM
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtccaaagaatttgacgtcgtcgtgatcggcgcaggccccggcggttatatcgccgcc
atccgcgcagcgcaactcggcaagaccgtcgcgtgtatcgagaaatggaagaacccggcc
ggcgcgctgaagctcggcggcacctgcctgaacgtgggttgcattccgtcgaaggcgctg
ctcgcgtcgtcggaagaatttgaaaacgcatcgcatcacctgggcgaccacggcatctcc
gtggaaaacgtcaaggtcgacatcgcgaagatgctggcccgcaaggaaagcatcgtcgag
aagatgaccaagggtatcgaattcctgttccgcaagaacaagatcacgtggctcaagggt
catggcaagttcaccggcaagacggacgccggcgtgcagatcgaagtgagcggcgaaggc
gaaacggaagtcgtcacggcaaagaacgtgatcatcgccacgggttcgaaggcgcgccat
ctgccgggcattccggtcgacaacaggatcgttgccgacaacgaaggcgcactgacgttc
gacaccgtgccgaagaagctggccgtgatcggcgccggcgtgatcggtctggaactcggt
tcggtgtggcgtcgtctgggcgcggacgtgaccgtgctcgaagcgttgccggaattcctc
ggcgcggctgaccagtcgctcgctaaagaagccgccaagcagttcaagaagcagggtctc
gacattcacgtcggcgtgaaggtcggcgaaatcaaggcaacggacaagaacgtcacgatc
gcctacacggacaaggacggcaacgcgcaatcgctcgaagccgaccgtctgatcgtgtcg
atcggccgcgtgccgaacaccgacaacctcggcctcgaagcgatcggcctgaaggccaac
gaacgcggcttcatcgacgtcgacgaccattgcgcgacggcggtgccgaacgtgtacgcg
atcggcgacgtggtgcgtggcccgatgctcgcgcacaaggcggaagacgaaggcgtgctg
gtggccgagatcatcgacggtcagaagccgcatatcgactacaactgcattccgtgggtg
atctacaccgaaccggaaatcgcgtgggtcggcaagaccgaacagcaactcaaggcggaa
ggccgcgaagtcaagacgggccagttcccgttcatggcgaacggccgcgcgctgggcatc
aacaaggcggatggtttcgtcaagatgatcgccgacgcgaagaccgacgaactgctcggc
gtgcatatcatctcggccaacgcatcggacctgatcgcggaagccgtggtggcgatggag
ttcaaggcggcgtcggaagatctcggccgcatttgccatccgcacccgtcgctgtcggaa
gtcatgcgcgaagcggctctggccgtggacaagcgcgcgctgaacatgtaa

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