Paraburkholderia bryophila: NDK50_08670
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Entry
NDK50_08670 CDS
T08797
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03030
DNA replication
pbry03430
Mismatch repair
pbry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NDK50_08670 (dnaX)
03430 Mismatch repair
NDK50_08670 (dnaX)
03440 Homologous recombination
NDK50_08670 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbry03032
]
NDK50_08670 (dnaX)
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_08670 (dnaX)
Enzymes [BR:
pbry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NDK50_08670 (dnaX)
DNA replication proteins [BR:
pbry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NDK50_08670 (dnaX)
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NDK50_08670 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
AAA_18
TsaE
AAA_assoc_2
Mg_chelatase
AAA_2
DUF3646
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WCM21505
LinkDB
All DBs
Position
1:1905372..1908248
Genome browser
AA seq
958 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVTHLEHILDEEKVPFDAQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALAEGDGAAVLAVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAADLRRFADALSAEHVQLFYQIATIGRGELGLAPDEYAGFTMTLLRMLAFEP
APTGGGGGAAGASRAAGAGGAGGGGGGARRAGAPAVAAQQGAMGSSVAAERAAPTLSSSS
SSRETMAAPVSTGEAQTHRAMEAPRAAPGMVAASAASTTEAVPASAAEAVPLAPWDDAPV
ESSATATPAVSGENVVTATPAASSENAATATDVSTASDPSVEVEVEVEVSAVSEIEATVP
SEDSAASNANATVPSEVSVASNPSAPVAADIPAASGVKLPAVSEAAASADGVPAAMEMPA
ASGDLGASVAAQASGASGLDNQQPASSPTAPASAAFARAEEAASAVAPQEPSPAADIAPR
RAGGASAALDVLRSAGLKVSSDRGRAAAAAAPTPKPAAPRVVVPVPTPGAPRRVAQQDAA
PAAPAARAASAAQRDGAQRDGAQRNGAEQNGSAVPPWDDMPPDDYVPLSASDDGYYGPPD
DNYMPVFDSGPDDVRMNAAPAPSAAPVIDKRPLPPAVPLDPLGFNGDWPALAVDLPLKGI
SYQLAFNSELMALEGNTLKLNVPVPQYAEASQVAKLKSALADKLGRHVEVLVEVGAARRT
AAAHDAATRAQRQQEAEREIGADPFVQSLIREFGASIVPGSIRPITPDAGPAGAPSVH
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcttcgctcgtcgga
caggagcacgtggtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcaccatgcc
tatctgtttaccggtacgcgcggtgtcggcaaaaccacgctgtcgcgcatcttcgccaag
gcgctgaattgcgaaaccggcgtgacgtccacgccgtgcggcgtgtgccgcgcgtgccgc
gagatcgacgaagggcgtttcgtcgattatgtggagatggacgcggcgagtaatcgcggg
gtcgacgaaatggcggcgctgctggagcgcgcggtttatgcgccggtcgacgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctcaccaaccacgccttcaacgcgatgttg
aagacgctggaagaaccgcccgcgcacgtcaagttcattctcgccacgaccgacccgcag
aagattccggtcacggtgctgtcgcgctgtctgcagttcaatctgaagcagatgccggcc
ggccatatcgtcacgcatctcgagcacattctcgacgaagagaaggtgcccttcgacgcg
caggcgctgcgcctgctcgcgcgtgccgcggacggctcgatgcgcgacgcgctgtcgctg
accgatcaggcgatcgcctattcggccaatcaggtcaatgaagaagcggtgcgcggcatg
ctcggcgcgctcgatcaaagctatctgatccgcctgctcgacgcgctcgccgagggcgac
ggcgcggcggtgctggcggtcgccgacgaaatggcgctgcgcagcctgtcgttctcgacg
gcgttgcaggatctggcgagcttgctgcatcgaatcgcgtgggcgcagttcgcgccgtcg
tcggtgctggacgaatggccggaggcggccgatctgcgccgtttcgccgacgcgctcagc
gccgagcacgtgcaactgttttatcagatcgccacgatcggccgcggtgaattgggcctc
gcgcccgacgaatacgccggtttcacgatgaccttgctgcgcatgctggcgttcgaaccg
gcgcctacgggcggcggtggcggcgcggcgggtgcgagccgtgctgcgggtgctggtggt
gctggtggtggtggtggtggtgcacgacgcgccggtgcgccggctgtggccgcgcagcaa
ggggcgatgggctcttccgttgcggctgagcgtgcggcgccgacgttgtcgtcgtcgtcg
agttctcgcgaaacgatggccgcgccggtgtcgactggcgaagcacagacccatcgcgcg
atggaagcgccgcgagccgcgcccggcatggtagctgcgtcggcggcatcgacaactgaa
gcggtgcccgcaagcgcagcggaggcagttccgctggctccatgggacgatgcgcccgtt
gagtcttccgcgaccgcaacacctgcggtttcaggtgagaacgtcgtgaccgcaacacct
gcggcctcaagtgagaacgccgcgaccgcaacggatgtttccacagcgtccgatccgagc
gtcgaggtcgaggtcgaggtcgaagtctcggcggtatctgaaatcgaagccacggttcct
tctgaagactctgcagcgtctaacgccaatgccacggttccttcagaagtctccgtagcg
tctaacccgagcgctccggttgccgcggatatccctgcggcgtctggcgtgaaactgccg
gctgtgtccgaagccgccgcgtctgctgatggcgtcccggctgcgatggaaatgccggca
gcgtccggcgacctcggcgcctcagtggcggcgcaagcctcgggcgcgtccggcctcgat
aaccaacaacccgcgtcgtcaccaaccgcacctgcaagcgccgcgttcgcacgcgcggaa
gaggcggcgtccgccgtcgcgccgcaggaaccgtcgcccgccgcggacattgcgccgcgt
cgtgccggcggcgctagcgccgcgctcgacgtcctgcgcagcgccggtttgaaagtgtca
tcggatcgtggccgggcagcggcagccgccgcgcccacgccgaaaccggcggcgcctcgc
gtcgtcgttccggtgccgacgccgggcgcaccgcgccgcgttgcgcagcaagacgccgca
ccggccgctcccgccgcccgcgcggcgtcggccgcccaacgcgatggcgctcaacgcgat
ggcgcccaacgcaacggcgccgagcagaacggttcggcggtgcccccctgggacgacatg
ccgcccgacgactacgtgccgctgtcggcctcggacgacggctactacgggccgccggac
gacaactacatgccggtcttcgacagcggtccggacgacgtgcgcatgaacgccgcgccc
gctccgtcggcggcaccggtgatcgacaagcgtccattgccgcccgccgtgccgctcgac
ccattgggtttcaacggcgactggccggcgctggccgtcgacctcccgctcaagggcatt
tcctatcagctcgcattcaacagcgaactgatggcgctcgagggcaacacgctcaaactg
aacgtgccggtgccgcagtacgcggaagcgtcgcaggtcgccaaactgaaaagcgcgctt
gccgacaagctcggccgccacgtcgaggtgctggtcgaagttggtgcggctcgccgcacg
gccgccgcgcacgacgccgcgacgcgcgcgcagcgccagcaggaagcggagcgcgagatt
ggcgccgatccgttcgtgcagtcgctgatccgcgagttcggcgcgagcatcgtacccggc
tcgatccgcccgattacgccggacgctggccccgccggcgcgccgtcggtccactga
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