Paraburkholderia bryophila: NDK50_08825
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Entry
NDK50_08825 CDS
T08797
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NDK50_08825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_08825
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NDK50_08825
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ku
DUF1045
TFIIF_alpha
SRP-alpha_N
Motif
Other DBs
NCBI-ProteinID:
WCM21535
LinkDB
All DBs
Position
1:1942147..1943238
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AA seq
363 aa
AA seq
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MAHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRSIDPIGYKQINKRTGKDVTREN
IVRGFEYEKDRYVVLSDDEIRSANPESTQTVDILAFVDAAAISFLYLDTPYFLTPDRKGE
KVYALLREAMKATGKIGVANVVLHNKQHLAALIPVGPVLALNTLRWAAEVRDFDEFKLPA
DGMKAAGVSTRELDMAKKLIQDMSDAWDPSNYRDTFHDDIMALVERKIRAGKTEEITEVE
TPRESRRSADILDLSDLLKRSLGRGKGKPAKGGRKRAADDGDDADEAGDEADTDADAKTS
TPARKKPRSTRGAGTSGTSGTKATTRSRTSSASGASRAAPKSAKTSKTASTSAPSARKRR
AAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcacacatgatctggaagggcgcaatcagtttcggcctcgtccacgtgccggtgcag
ttatatccggccacgcagtcggagaaagtcggtttcaatctgctcgacaaacgctcgatc
gatccgatcggctacaagcagatcaataagcgcaccggcaaggacgtgacgcgcgagaac
atcgtgcgcggtttcgaatacgagaaagaccgctacgtcgtgctgtcggacgacgagatt
cgctcggcgaatcccgagtcgacgcagacggtcgatattctcgctttcgtcgacgcggcc
gccatctcgttcctctatctcgacacgccttacttcctgacgccggatcgcaaaggggaa
aaggtctacgcgctgttgcgcgaagcgatgaaagcgaccggcaagatcggcgtggcgaac
gtcgtgctgcacaacaagcagcatcttgcggcgctgattccggtcgggcccgtgctggcg
ctcaatacgctgcgctgggccgccgaggtgcgcgacttcgacgaattcaagctgccggcc
gacggcatgaaagccgccggcgtgagcacccgcgaactcgacatggcgaaaaaactgatc
caggacatgagcgatgcctgggatccgtcgaactatcgcgataccttccacgacgacatc
atggcgctcgtcgagcgcaagatccgcgcaggcaagaccgaagagatcacagaagtcgaa
acgccgcgcgagtcgcgtcgctcggccgatattctcgatctgtccgatctgctcaaacgc
agtctgggccgcggcaaaggcaagccggccaagggaggccgcaagcgcgccgcggacgat
ggagatgacgcagacgaagcgggcgatgaagcggataccgacgcggatgccaaaacaagc
accccggctcgtaaaaaacctcgctcgacgcgtggcgcgggtacttcgggcacgtcgggt
acgaaggctacgacgcgtagccggaccagcagcgccagtggcgcaagccgtgccgcacct
aaatcagcaaagacctcgaagaccgcatcgacatccgcaccatcggcgcgtaaacgccgc
gcggccgcctga
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