KEGG   Paraburkholderia bryophila: NDK50_09485
Entry
NDK50_09485       CDS       T08797                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pbry  Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:pbry00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbry02044]
    NDK50_09485 (tssC)
Secretion system [BR:pbry02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NDK50_09485 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WCM21657
LinkDB
Position
1:2105434..2106969
AA seq 511 aa
MERNEPQQSGATRIAVLACPTVYESLCSKINLRPVNEARPVEAFQDHDLLSESSADERLA
RAMSVFLKLVNEGSRQVDRLDKSLLDFHIGRLDRQIGRQLDAVMHAREFQALESRWRGLK
FTVDRTDFRKNVRIELLDVSKECLLRDFEDTPELVQSGLYRHTYIEEYDTPGGQPITAMI
GDYEFTNSPQDISLLRNLSKVASAAHMPFVGSVGPKFFGKKTMEEVAAIQDIGNYLDRAE
YIKWKSFRDTDDARYIGLTMPRVLGRLPYGADTTPVRSFSYEEAVKGADHDRYLWVNASF
AFAANMVRSFVSNGWCVQIRGPQAGGKVEDLPVHLYDLGTGYQPKIPTEVLIPETREFEF
ANLGFIPLSFYKNHDFACFFSASSAQKPARYETREATANSRINARLPYIFLLSRIAHYLK
LIQRENIGTTKDRRLLELELNSWIKGLVTEMKDPGDELQSSHPLREAKVVVEDIDDNPGF
FRIKLFIVPHFQVEGMDIGLSLVSQMPRAKS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggaacgcaacgaaccacaacaatccggtgcaacgagaatcgcagtattagcgtgcccc
accgtttacgaatcgctttgcagcaagatcaacctgagaccggtgaacgaagctcgcccg
gtagaagccttccaggatcacgatctgctctctgagtcgtcggccgacgaacggcttgcg
cgagcgatgagcgtgttcctcaaactggtgaacgagggcagcaggcaggtcgaccgtctc
gacaagtcgttgctcgattttcacattggacggctcgaccggcagatcggccggcaactg
gacgccgtgatgcacgcccgggaatttcaggcgctggaaagccggtggcggggcctgaag
ttcacggtcgaccgtacggactttcgcaagaatgtgcgtatcgagttgctcgatgtatcg
aaagaatgtctgttgcgcgatttcgaagatacgcctgagctcgttcagagcggcctgtac
cgccacacctacatcgaggaatacgacacgcccggcggtcagccgatcaccgcaatgatc
ggcgactacgagttcacgaattcgccgcaagatatcagcttgctgcgcaatctctccaag
gtggcgtcggctgcgcatatgcctttcgtcggctcggtggggccgaagtttttcggtaag
aaaaccatggaagaagttgccgcgatccaggatatcggcaactacctcgaccgcgcggag
tacatcaaatggaagagctttcgtgacacggacgacgcgcgctacatcggactgaccatg
ccgcgcgtgctcgggcgcttgccctatggggcggacaccacgccggtacgcagtttcagc
tatgaggaagcagtgaaaggcgcggaccatgaccgctatctgtgggtcaatgcctcgttt
gcatttgccgcgaacatggtgcgcagtttcgtaagcaatggctggtgcgtgcagattcgc
gggccgcaggccggtggcaaggtcgaagacctgccggttcatctgtacgacctcggcacc
ggttatcagccgaagattccgaccgaagtactgattcccgaaacacgggaattcgagttc
gctaacctcggtttcattccgttgtcgttctacaagaaccacgacttcgcgtgcttcttc
tcagccagttcggcgcaaaaacctgctcggtacgagaccagggaggcaactgcgaacagt
cgtatcaacgcgcgcctgccctacatttttctgctttcacgtatcgcgcactacctcaag
ctgattcagcgcgaaaacattggcacgaccaaagaccggcgtctgctcgaactcgagctg
aatagctggatcaagggtctcgtgactgagatgaaagatcccggcgatgaactgcagtcg
tcgcacccgttgcgcgaggcgaaagtggtggtggaggacatcgacgataacccggggttc
ttccgcatcaaacttttcatcgtgccgcattttcaggtggaaggaatggatatcggtttg
tccttggtgtcgcagatgccgagggcaaagagctaa

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