Paraburkholderia bryophila: NDK50_11700
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Entry
NDK50_11700 CDS
T08797
Name
(GenBank) Do family serine endopeptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry01503
Cationic antimicrobial peptide (CAMP) resistance
pbry02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NDK50_11700
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
NDK50_11700
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbry01002
]
NDK50_11700
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pbry03110
]
NDK50_11700
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
NDK50_11700
Peptidases and inhibitors [BR:
pbry01002
]
Serine peptidases
Family S1: chymotrypsin family
NDK50_11700
Chaperones and folding catalysts [BR:
pbry03110
]
Other chaperones and cochaperones
DegP / HtrA
NDK50_11700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
Trypsin
PDZ
Pept_S41_N_bact
Peptidase_S46
PDZ_Tricorn
PDZ_1
Flu_PB2_7th
DUF6288
Motif
Other DBs
NCBI-ProteinID:
WCM18143
LinkDB
All DBs
Position
1:complement(2605987..2607399)
Genome browser
AA seq
470 aa
AA seq
DB search
MGMAVLISMSMLMCASTAVWAANAGAANGVSSGASANASNGTSLTMPNFAALVKRYGQAV
VNISVTREVTQMGIQLPPGIAPGNPLAPFLARRVIGNREEVSLGSGFIVSPDGVILTNRH
VVGDATTVDVKLTDKRQFKGTVIGSDALSDVAVIRIDARNLPAVVTGNPARTEVGDWVMA
IGSPYGFANTVTQGIVSAKWRSLPGESYIPFIQTDVPINPGNSGGPLFDLNGRVIAINSM
IYSKTGGYQGLSFAIPIDVALDVKEQLLKTGKVTRGRLGVALQEVSQALARSFGLAQPDG
ALISMVEPGGPGAQAGLLAGDVVLGVQGDPVADPVDLLDTIARMKPGQKADLLVWRASAR
TQVQVTLGALDSGVASSGNPKGPARIGLSLRPLNGPEQQQFGVDRGLLVEQASGQAARVG
LKAGDIVLSVNGTPVATIDALIAEIGAAHGTVALLVQRGGSRLYLPMEPD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggccgtgctgatctcgatgtcgatgctgatgtgcgcgagcacggcggtctgg
gcggcgaacgccggcgcggcgaatggtgtatcaagcggcgcatcagccaacgcatcgaac
ggcacgtcgctgaccatgccgaatttcgccgcgctcgtcaaacgctacggtcaggcggtg
gtcaacatcagcgtcacgcgcgaggtcacgcagatgggcatccagttgccgcccggcatc
gcgcccggcaatccgcttgcgccgtttctcgcccggcgcgtgatcggcaatcgcgaagag
gtgagcctcggctcgggattcatcgtgagtccggatggcgtgattctgaccaaccggcac
gtggtcggcgacgcgacgaccgtcgacgtgaagctgaccgacaagcgtcagttcaagggc
acggtgatcggcagcgacgcgctgtctgacgtcgcggtgatccgcatcgacgcccgcaat
ctgccggccgtcgtcaccggcaatccggcccgcaccgaggtcggcgactgggtgatggcg
atcggttcgccgtacggattcgcgaatacggtgacgcaagggatcgtcagcgcgaagtgg
cgctcgctgccgggcgagagctacatcccgttcattcagaccgacgtgccgatcaatccc
ggcaactcgggcggtccgctgttcgacctgaacggccgcgtgatcgcgatcaattcgatg
atctattcgaagacgggcggctatcaggggctgtcgttcgcgattccgatcgacgtggcg
ctcgacgtgaaggagcaactgctcaagaccggcaaggtgacgcgcggacggctcggggtc
gcgttgcaggaagtcagccaggcgctcgcgcggtcgttcggactggcgcagccggatggc
gcgctgatcagcatggtggaacccggcggccccggtgcgcaggccggactgctcgccggc
gatgtcgtgctcggcgtgcaaggcgacccggtggccgatcccgtcgatctgctggacacc
atcgcaaggatgaagccggggcaaaaggccgatcttctggtctggcgcgcgagcgccagg
actcaggttcaggttacgttgggcgcgctcgacagcggcgttgcatcgagcggcaacccc
aaagggccggcgcgcatcgggctgagcctgcggccgttgaacggcccggaacagcagcag
ttcggggtcgaccgtggcttgctggtcgaacaggccagcggacaggctgcgcgtgtcggc
ctgaaggcgggcgatatcgtgctgtcggtcaacggcaccccggtcgcgacgatcgatgcg
ctgatcgccgaaatcggtgcggcgcacggcacggtcgcgctgctcgtgcagcgcggcggg
tcacggctataccttcccatggaaccggactaa
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