Paraburkholderia bryophila: NDK50_12175
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Entry
NDK50_12175 CDS
T08797
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDK50_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_12175
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NDK50_12175
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NDK50_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PT
Motif
Other DBs
NCBI-ProteinID:
WCM18232
LinkDB
All DBs
Position
1:complement(2730258..2731613)
Genome browser
AA seq
451 aa
AA seq
DB search
MALHDSVLEEFGLAPLWVRRGMAAQPAVSEATEAASGHDASGAAAVEPEMRRATVSDAAA
ESLSGARATGTSGAATPSSDDRQSGAAQTAAQSPGGYRTAQPSQRPLHQPQQQPSQQPSQ
QPSQQPLQRPLQQTSQRPLHQPSQQPAARDRADDRAAPIRAGESSRPVQDGRPNERRTQP
AQPEAQTRSQPLATATPHQPKPPTRPAPQSRAPEQSPSFDAPPDDDFAWFDDLPTEAPGN
GHAPSETRREAPQPPAIHSLDWDALSERVAGCESCRLCEKRTNTVFGVGDRNADWMLIGE
APGENEDRQGEPFVGQAGKLLDNMLRSLTLARDTNVYIANVIKCRPPGNRNPEPDEVARC
EPYLQRQVALVKPKLIVALGRFAAQSLLRTEASISSLRGRVHEYEGVPVIVTYHPAYLLR
SLPDKAKAWADLCLARDTWRAAGGAPANPPK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcatgattcggtactggaagagttcggcctcgcgccgctgtgggtgcgtcgt
ggaatggcggcgcagccggctgtgtctgaagcgaccgaggcggccagcgggcacgatgcg
tccggcgcagccgcagtcgagccggagatgcgccgagcgaccgtaagcgacgcggcggct
gagtcgctgtcaggcgcacgcgcaacgggaacgtccggggcggctacgccttcgagcgat
gaccggcagtccggcgcggcgcaaactgccgcgcaatcgccaggtggataccgcacggct
caaccgtcgcagcggccgttgcaccaaccgcagcagcagccgtcccagcagccgtcgcag
caaccgtcgcagcaaccgttgcagcggccgttgcagcaaacgtcacagcggccgttgcac
caaccgtcccagcaaccggccgcacgcgaccgcgccgacgatcgcgccgcgccgattcgc
gccggcgaatcatcgcgtcccgtacaggacggccggccaaacgagcgccgtacgcaaccg
gcacaacctgaagcccaaacccgctcgcaaccgctcgccaccgcaacaccgcatcaaccg
aagccgccaacccggcccgcgccgcaatcgcgtgcgcctgaacaatcgccgtcattcgac
gccccgcccgacgacgatttcgcgtggttcgacgatctgccaaccgaggcgcccgggaac
ggacacgctccgtccgaaacccgtcgcgaagccccccaaccgccggcaatccactcgctc
gactgggacgcgttgagcgagcgcgtcgccggctgcgaaagctgccggttgtgcgagaaa
cgcaccaacacggtattcggcgtcggcgatcgcaacgccgactggatgctgatcggcgaa
gctcccggcgagaacgaagatcgtcagggcgagccgttcgtcggccaggccggcaagctg
ctcgacaacatgctgcgttcgctgacactcgcgcgcgacaccaacgtctacatcgccaac
gtgatcaagtgccgcccgcccggcaaccgcaatcccgagccggacgaagtcgcgcgctgc
gagccgtatctgcagcgtcaggtggcgctggtcaagccgaagctgatcgtcgcgctcggc
cgtttcgccgcacaaagtctgctgaggaccgaggcgagcatttcgtcgttgcgtggccgc
gtgcacgaatacgaaggcgtgccggtgatcgttacctatcacccggcgtatctgctgcgc
agcctgccggacaaggcgaaggcgtgggccgatctgtgcctcgcgcgcgacacgtggcgc
gcggccggcggcgcgcccgcgaacccgccgaagtga
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