Paraburkholderia bryophila: NDK50_12490
Help
Entry
NDK50_12490 CDS
T08797
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_12490
Enzymes [BR:
pbry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NDK50_12490
DNA repair and recombination proteins [BR:
pbry03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NDK50_12490
Prokaryotic type
NDK50_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WCM18288
LinkDB
All DBs
Position
1:complement(2814729..2816009)
Genome browser
AA seq
426 aa
AA seq
DB search
MSRWHKPEASDGILITDDPVPDGDLGAPAPTLAAARARIAAVQPTAYARTRNALDGAVTG
LSPYITHGFITLPEVVAGVSARRTLDVQHKFIYELGWREFFHHVWHLQGEAIFESIHEGP
LPEHVYAKELPADIRQGNTGVPVVDMAVRELYATGTLHNHARMWLASYVVHQRKVHWRAG
ADWLYAHLLDGDLASNHLSWQWVAGTGSSKPYVFNAENVARYAPPAWHSPGSVIDTSYES
LDRIARGVDSPALTQRDIVDQRRIFEEPRLLSVPPDELGASAPESTTVAGRDVWLVHPWS
LGELPVDLPAETVVIGLFLSDFHQVWPWNERRWRFVGTRMREITELCWIADSVSVRHALG
GAKQVRSVSNPHLAPYLEQWAKCTSARPLFPAVDELHPSFSKWWARASRDLHTTADLLAY
NAMLPQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggtggcataaacccgaggcgtccgatggcatcctgattacggatgaccctgta
ccggacggtgatctgggcgcgcccgcaccgaccctcgctgctgctcgagcacgcattgct
gccgtgcagcctaccgcgtacgcccgtacccgcaacgcactcgacggcgccgtcaccggc
ctgtcaccttatatcactcatggtttcatcacgttgcccgaggtggtggctggcgtgagt
gcgcgccgtacgcttgatgtgcagcataagtttatctatgagcttggatggcgtgagttt
ttccatcacgtctggcatctccagggcgaagcgattttcgagtccattcatgaaggtcca
ctccctgagcatgtctatgcgaaggagttgcccgccgacatccgacagggcaacaccggc
gttccggtcgtagatatggctgtgcgcgagctttacgcaaccgggacgctgcacaaccat
gcgcgtatgtggctggccagctacgtagtgcaccagcgtaaggtgcactggcgtgccggc
gctgactggttgtatgcccatctgttggacggcgatctcgcgagcaaccacctgagctgg
cagtgggtggccggcacgggaagcagcaagccctacgtgttcaacgcagaaaacgtcgcc
cgctacgcgccgccagcctggcacagtccgggcagtgtgatcgacacatcgtacgaatcc
ctggaccgtattgctcgcggagttgactctccggcgctgacccagcgagatatcgtagat
caacgtcggatttttgaagaaccaaggctgctgagtgtccctcccgatgagttgggagcc
tcggcaccggagtcgacaacggttgccggacgtgacgtttggctagtccatccctggagc
ctgggagagctgccggttgatctgccggctgagaccgtggtgattggcttgttcctttct
gactttcatcaggtgtggccctggaatgaaaggcgctggcgcttcgtaggaacgcgcatg
cgcgagatcacggagctatgttggatcgcggattcggtttccgtacgccacgcattaggg
ggcgcgaaacaggtgcgcagtgtgtcaaatcctcatctggcgccttacctggagcagtgg
gcgaagtgcacttctgcgcgaccactttttcctgcggtagatgagctgcatccctccttc
tcgaagtggtgggctcgagcctcacgcgacttgcataccaccgccgacttgctggcgtat
aacgcgatgctgccacagtag
DBGET
integrated database retrieval system
