Paraburkholderia bryophila: NDK50_12960
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Entry
NDK50_12960 CDS
T08797
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDK50_12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_12960
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NDK50_12960
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NDK50_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF2486
Motif
Other DBs
NCBI-ProteinID:
WCM18365
LinkDB
All DBs
Position
1:complement(2899744..2900796)
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AA seq
350 aa
AA seq
DB search
MATATKTPAKRATSQTGAAAAAKSTRTSARSGSGAVKKASSKAGGAAAKGATGAAKKPAA
KRALNGASAPASVSAKRAKAPRAKSNGALPAELAGDVQELARVTQEGHEGEVVRKTRASS
SAGGEGTSASEVAVPVQIGGLAPEETRPAYWDKACADLVKRDRILKKLIPKFGPVHLLSR
GDPFVTLARSVVGQQISVASAQAVWAKVEAACPKLVPQQFIKLGQEKLTACGLSRRKAEY
VLDLAQHFVSGALHVGKWTTMEDEAVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDL
GLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDPLPVEY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccacgaagacgccggctaaacgagccacgtctcaaacaggcgcggcagcc
gccgcaaagtcgactcgaacgtcggctcgcagcggcagcggcgcggtaaaaaaagcatcg
tcgaaagccggtggggcggcggccaagggtgcaacgggcgcggcgaaaaagccggcggcg
aagcgggcgctcaatggcgcatcggctccggcgtctgtgtccgcgaagcgcgccaaggcg
ccgcgtgcgaagagcaacggcgcgttgccggccgaactcgcgggcgacgtgcaggaactc
gcccgcgtcacgcaggaaggtcacgaaggcgaagtcgtgcgcaagacgcgtgcgtcgtcg
agcgcaggcggggaagggacgagcgcgagcgaagtcgcggtgccggtgcagatcggcggt
ctcgcgcctgaagagacgcggcccgcgtattgggacaaggcgtgtgcggacctcgtcaag
cgcgatcgcattctgaagaagctgattccgaaattcggtccagtgcatctgctgagccgt
ggcgatccgttcgtcacgctcgcgcgttcggtggtcggccagcagatttcggtcgcatcg
gcgcaggcggtgtgggccaaggtcgaagccgcgtgtccgaagctggtgccgcagcagttc
atcaagctcggtcaggagaagctgactgcgtgcggtttgtccaggcgcaaagcggagtac
gtgctcgatctcgcgcagcacttcgtgtcgggcgcgttgcacgtcggcaagtggacgacc
atggaagacgaggcggtgatcgccgaactcacgcagattcgaggcatcggccgctggacc
gcggagatgttcctgatcttcaatctgtcgcgtcccgacgttctgccgctcgacgatctc
ggtttgatccgcgcgatcagcgtcaactatttcagcggcgaaccggtcacgcgcagcgaa
gcgcgcgaggtcgcggcaaactgggagccgtggcgtaccgtcgcgacctggtatatgtgg
cgtagtctcgatccgttgccggtcgaatactga
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