Paraburkholderia bryophila: NDK50_13025
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Entry
NDK50_13025 CDS
T08797
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NDK50_13025 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_13025 (mutS)
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NDK50_13025 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS_C
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
WCM18378
LinkDB
All DBs
Position
1:2912443..2915142
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AA seq
899 aa
AA seq
DB search
MEETTAKPDVKSIDLSNHTPMMQQYLRIKADHPGTLVFYRMGDFYELFFDDAEKAARLLD
LTLTQRGASNGNPIKMAGVPHHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKVVR
VVTPGTLTDAALLSDKNDVYLMALCVAHNRRGVATGVGLAWLNLASGALRLAEVAPDQVA
AALERIRPAEILVADSTADSASWTPPVNAGALTRVPVWHFDIASGTQRLCDQLEVAGLDG
FGAHSLTAACGAAGALLLYAAATQGQQLRHVRSLKVEYESEYIGLDPATRRNLELTETLR
GTESPTLCSLLDTCCTTMGSRLLRHWLHHPPREAAVAQARQQAIGALLDAPPGTSVDALR
GALRQISDIERITGRLALLSARPRDLSSLRDTFIALPDLRMQLAAVSSNADSLARIDASL
VPPQDCVELLKRAVAQEPSAMVRDGGVIARGYDADLDELRDISENCGQFLIDLETRERAR
TGIGNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQ
ERALARERSLYDALLQALLPFIPDCQRVASALAELDLLAAFAERARALDWVAPSFSPNTG
IEIEQGRHPVVEAQVEQFIANDCTLTPERKLLLITGPNMGGKSTFMRQTALIALLAYVGS
YVPARRAAFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG
TSTFDGLALAWAIARHLLSHNGCHTLFATHYFELTQLPAEFPHAANVHLSAVEHGHGIVF
LHAVNEGPANQSYGLQVAQLAGVPNAVIRAARKHLAHLEQQSAAQPAPQLDLFAAPMPML
LEDTDDERYAEPQTAALPPAMQALAERLRAIDPNDLRPREALDLLYELHELATEPDADH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacgaccgcaaaacctgacgtgaaaagcatcgacttaagcaatcacacgccc
atgatgcagcaatacctgcgcatcaaagcggatcatccgggcacgctggtgttctaccgg
atgggcgacttctacgaactctttttcgacgacgccgaaaaggccgcccgtctgctcgat
ctgacgctcacgcagcgcggcgcgtcaaatggcaatccgatcaaaatggccggcgtgccg
catcacgcagtcgagcaatatctggccaagctggtgaagctcggcgaatccgtcgcgatc
tgcgaacagatcggcgacccggcgacgtcgaagggccccgtcgaacgtaaagtggtacgc
gtggtgacgccaggcaccctcacggacgccgcgttgttgtccgacaagaacgacgtctat
ctgatggcgctgtgcgtagcgcacaaccgccgcggcgtcgcgaccggcgtcgggctggcg
tggctgaatctggcgagcggcgcgttgcgcctcgcggaagtcgcgcccgaccaggtggcg
gccgcgctcgaacgcattcgtcccgcggaaattctggtggccgattccaccgcggattcc
gcgagctggacgccgcccgtcaatgccggcgccctcacccgcgtgccggtgtggcacttc
gatatcgcgtcgggcacgcagcgtctttgcgatcaactggaagtggcgggcctcgacggc
ttcggcgcccattcgctgacggccgcatgcggcgcggccggcgcgttgctgctgtacgcg
gcggccacgcaaggccagcaattacgccacgtgcgcagcctgaaggtggaatacgagtcc
gaatatatcggcctcgacccggccacccgccgcaacctcgaactcaccgaaacgctgcgc
ggcaccgagtcgcccacgctgtgctcgctgctcgacacctgctgcacgaccatgggcagc
cggctgctgcgtcactggctgcatcacccgccgcgcgaggcggcggtggcgcaggcacgg
cagcaagccatcggcgcgctgctcgatgcgccgcccggcacgagcgtcgacgcgctgcgc
ggcgcgctgcggcaaatctcggatatcgaacggatcaccgggcgtctcgcgctgttgtcc
gcgcggcctcgcgatctgtcgagcctgcgcgacacgttcatcgcgttgcccgacctgcgc
atgcagctcgcggcggtgtcgtccaacgctgattcgctcgcgcgtatcgacgcgtcgctc
gtgccgccgcaagactgcgtcgagttgctcaagcgcgcggtcgcgcaggagccgtcggcg
atggtacgcgacggcggcgtgatcgcacgcggttatgacgcggacctcgacgagttgcgc
gatatttcggagaactgcgggcagttcctgatcgacctcgaaacacgcgagcgcgcccgc
acgggcatcggcaatctgcgcgtcgagtacaacaaggtgcacggcttctatatcgaagtc
acgcgcggtcagaccgacaaagtacccgacgactatcgccgccgtcagacgctgaagaac
gccgagcgctacatcacgcccgagctgaaaactttcgaggacaaagcgctgtccgcgcag
gaacgcgcgctggcacgcgaacgctcgctgtacgacgcgctgctgcaggcgctgctgccc
tttatccccgactgccagcgggttgcttcggcgctcgccgaacttgatctgctggccgcc
ttcgccgaacgcgcccgcgcgctcgactgggtcgcgccgagcttctcgccgaataccggt
atcgaaatcgagcaggggcgtcacccggtcgtcgaggcacaggtcgagcagttcatcgcc
aacgactgcacgctgacacccgagcgcaaactgctgctgatcaccggcccgaacatgggc
ggtaaatcgaccttcatgcggcagaccgcgctgatcgcgctgctggcttacgtaggcagc
tacgtgccggcccggcgtgcggcgttcggaccgatcgaccgcatcttcacgcggatcggc
gcggccgacgacctggccggcggccgctcgaccttcatggtggaaatgaccgaagccgcc
gcgatcctcaacgacgcgacaccgcaaagtctcgtgctgatggatgaaatcggccgcggc
acgtcgaccttcgacgggctcgcgctggcttgggcgatcgcgcgccatctgctgtcgcac
aacggctgccatacgctgttcgccacgcattacttcgaactcacgcagttgccggccgag
tttccgcacgcggccaacgtgcatctgtcggcggtcgagcatgggcacggcatcgtgttc
ctgcacgcggtcaacgaagggccggcgaatcagagctacggtctgcaggtcgcgcagctc
gcgggcgtgccaaacgcagtgattcgcgcggcgcgcaagcatctcgcgcatctcgagcag
caatcggcagcgcaacccgcgccgcaactcgatctgttcgccgcccccatgccgatgctg
ctcgaagacacggacgacgaacgctacgccgagccgcagaccgccgcattgccgcccgcc
atgcaggcgctcgccgaacgtctgcgcgcaatcgacccgaacgacttgcgcccgcgcgaa
gcgctcgacctgctgtacgaattgcacgagctggctaccgagccagatgcggatcattga
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