Paraburkholderia bryophila: NDK50_13240
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Entry
NDK50_13240 CDS
T08797
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00541
Biosynthesis of various nucleotide sugars
pbry01100
Metabolic pathways
pbry01250
Biosynthesis of nucleotide sugars
Module
pbry_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NDK50_13240 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pbry01005
]
NDK50_13240 (kdsA)
Enzymes [BR:
pbry01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NDK50_13240 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pbry01005
]
Lipid A
NDK50_13240 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WCM18418
LinkDB
All DBs
Position
1:complement(2960315..2961169)
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AA seq
284 aa
AA seq
DB search
MKLGDFEIGLDKPFFLIAGTCVVESEQMTIDTAGRLKEICAKLNIPFIYKSSYDKANRSS
GKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHAEHEIEQVASVVDVLQTPAFLCRQTDFI
HACARSGKPVNIKKGQFLAPGDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVS
DMRSLAIMRETHAPIVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVAVGVSGLFMETH
PNPAEAKSDGPNAVPLHRMADLLETLVTLDQAVKRAPFLESNFN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgggcgatttcgaaatcgggctcgacaagccgtttttcctgatcgcgggcacc
tgtgtcgtcgaatccgaacagatgacgatcgacacggcgggccggctgaaggaaatctgc
gcgaagctgaacattccgttcatctacaaatcgtcgtacgacaaagccaatcgcagcagc
ggcaagtcgttccgcggtctgggcatggacgaaggtttgcggattctgtcggaagtgaag
cgccagctcggtctgccggtgctgaccgacgttcacgccgagcacgagatcgaacaggtc
gcgtcggtggtcgacgtgctgcaaacgcccgctttcctgtgccgtcaaacggacttcatt
cacgcttgcgcgcgttcgggcaaaccggtcaacatcaagaaaggccagtttctcgcaccg
ggcgacatgaagaacgtgatcgacaaggcgcgcgatgccgcgcgtgaagccggtctgtcg
gaagaccgcttcatggcgtgcgaacgtggcgtgtcgttcggctataacaacctggtgtcg
gacatgcggtcgctggcgatcatgcgcgaaacccacgcgccgatcgtgttcgacgcgacc
cactcggtgcagttgccgggcgggcagggcaccagttcgggcggccagcgcgagttcgtg
ccggtgctggcgcgtgccgcggtcgcggtcggtgtgtcggggctcttcatggagacgcac
ccgaatccggccgaagccaaatcggacggtccgaacgccgtgccgctgcatcgcatggcc
gatctgctcgagacgctggttacgctcgatcaggccgtcaagcgcgcgccgttcctcgaa
agcaatttcaactga
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