Paraburkholderia bryophila: NDK50_13455
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Entry
NDK50_13455 CDS
T08797
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDK50_13455 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_13455 (xth)
Enzymes [BR:
pbry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NDK50_13455 (xth)
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NDK50_13455 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WCM18459
LinkDB
All DBs
Position
1:3013235..3014011
Genome browser
AA seq
258 aa
AA seq
DB search
MKIATWNVNSLKVRQQHVIDWLEASGTDVLCLQELKLTDDKFPRAELEEKGYRSWFAGQK
TYNGVGIVVRAGLSVDESSVVRNIPGFEDPQQRVIAATIEGVRIVSAYFPNGQAPGTDKF
EYKLRWLAALHDWVASEMALHPKFALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAEFV
RLIALGLTDAFRQFEQPEKIYSWWDYRMMAFRRNAGMRIDHILLSKALAEICISCEVDKV
PRKWEQPSDHAPVVAQLG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgccacctggaacgtcaactccctgaaagtgcgccagcaacacgtgatcgac
tggctcgaagccagcggcaccgacgtgctgtgcctgcaggaactgaaactgaccgacgac
aaattcccgcgcgccgaactcgaagagaaaggctaccgcagctggttcgccggccagaag
acctataacggcgtcggcatcgtggtccgtgcgggcctgagcgtcgacgaaagcagtgtg
gtgcgcaacattcctggcttcgaagatccgcagcagcgcgtgattgccgcgacgatcgaa
ggcgtgcgcatcgtctccgcgtatttcccgaacggccaggcgccgggcaccgacaagttc
gagtacaaactgcgctggctcgccgcgctgcacgactgggtcgcgagcgagatggcgctg
catccgaagttcgcgctgctcggcgactacaacatcgcgccggaagatcgcgacgtgcac
gatccgaaagcgtgggaaggccagaatctggtgtcgcccgaagagcgcgccgagttcgtg
cggctgatcgcgctcggtctcaccgacgcgttccgtcagttcgaacagccggagaaaatc
tactcgtggtgggactaccggatgatggcgttccgccgcaacgcggggatgcgcatcgac
catattctgctgtcgaaggcgctcgcggaaatctgcatctcgtgcgaagtcgacaaggtg
ccgcgcaagtgggagcagccgtcggatcacgcgccggtggtggcccaactcggttga
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